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G7RP94 (G7RP94_ECOC1) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:gadA EMBL AER91443.1
Ordered Locus Names:i14_3997 EMBL AER91443.1
OrganismEscherichia coli (strain 'clone D i14') [Complete proteome] [HAMAP] EMBL AER91443.1
Taxonomic identifier885275 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length487 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
G7RP94 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: D9D4B395B8F61060

FASTA48755,202
        10         20         30         40         50         60 
MLPLRINPTF LLPSNKFKEF EMDQKLLTDF RSELLDSRFG AKAISTIAES KRFPLHEMRD 

        70         80         90        100        110        120 
DVAFQIINDE LYLDGNARQN LATFCQTWDD ENVHKLMDLS INKNWIDKEE YPQSAAIDLR 

       130        140        150        160        170        180 
CVNMVADLWH APAPKNGQAV GTNTIGSSEA CMLGGMAMKW RWRKRMEAAG KPTDKPNLVC 

       190        200        210        220        230        240 
GPVQICWHKF ARYWDVELRE IPMRPGQLFM DPKRMIEACD ENTIGVVPTF GVTYTGNYEF 

       250        260        270        280        290        300 
PQPLHDALDK FQADTGIDID MHIDAASGGF LAPFVAPDIV WDFRLPRVKS ISASGHKFGL 

       310        320        330        340        350        360 
APLGCGWVIW RDEEALPQEL VFNVDYLGGQ IGTFAINFSR PAGQVIAQYY EFLRLGREGY 

       370        380        390        400        410        420 
TKVQNASYQV AAYLADEIAK LGPYEFICTG RPDEGIPAVC FKLKDGEDPG YTLYDLSERL 

       430        440        450        460        470        480 
RLRGWQVPAF TLGGEATDIV VMRIMCRRGF EMDFAELLLE DYKASLKYLS DHPKLQGIAQ 


QNSFKHT 

« Hide

References

[1]"Rates of Mutation and Host Transmission for an Escherichia coli Clone over 3 Years."
Reeves P.R., Liu B., Zhou Z., Li D., Guo D., Ren Y., Clabots C., Lan R., Johnson J.R., Wang L.
PLoS ONE 6:E26907-E26907(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 'clone D i14'.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002212 Genomic DNA. Translation: AER91443.1.
RefSeqYP_006156067.1. NC_017652.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAER91443; AER91443; i14_3997.
GeneID12666721.
KEGGelc:i14_3997.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycECOL885275:GJE6-4016-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG7RP94_ECOC1
AccessionPrimary (citable) accession number: G7RP94
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: May 14, 2014
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)