Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

G7R5K5 (G7R5K5_ECOC2) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
Name:gadB EMBL AER84314.1
Ordered Locus Names:i02_1744 EMBL AER84314.1
OrganismEscherichia coli (strain 'clone D i2') [Complete proteome] [HAMAP] EMBL AER84314.1
Taxonomic identifier885276 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length489 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
G7R5K5 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: D885B97966EBCAF7

FASTA48955,440
        10         20         30         40         50         60 
MHLLTLSINP TFLMRSNHFK EFKMDKKQVT DLRSELLDSR FGAKSISTIA ESKRFPLHEM 

        70         80         90        100        110        120 
RDDVAFQIIN DELYLDGNAR QNLATFCQTW DDDNVHKLMD LSINKNWIDK EEYPQSAAID 

       130        140        150        160        170        180 
LRCVNMVADL WHAPAPKNGQ AVGTNTIGSS EACMLGGMAM KWRWRKRMEA AGKPTNKPNL 

       190        200        210        220        230        240 
VCGPVQICWH KFARYWDVEL REIPMRPGQL FMDPKRMIEA CDENTIGVVP TFGVTYTGNY 

       250        260        270        280        290        300 
EFPQPLHDAL DKFQADTGID IDMHIDAASG GFLAPFVAPD IVWDFRLPRV KSISASGHKF 

       310        320        330        340        350        360 
GLAPLGCGWV IWRDEEALPQ ELVFNVDYLG GQIGTFAINF SRPAGQVIAQ YYEFLRLGRE 

       370        380        390        400        410        420 
GYTKVQNASY QVAAYLADEI AKLGPYEFIC TGRPDEGIPA VCFKLKDGED PGYTLYDLSE 

       430        440        450        460        470        480 
RLRLRGWQVP AFTLGGEATD IVVMRIMCRR GFEMDFAELL LEDYKASLKY LSDHPKLQGI 


AQQNSFKHT 

« Hide

References

[1]"Rates of Mutation and Host Transmission for an Escherichia coli Clone over 3 Years."
Reeves P.R., Liu B., Zhou Z., Li D., Guo D., Ren Y., Clabots C., Lan R., Johnson J.R., Wang L.
PLoS ONE 6:E26907-E26907(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: 'clone D i2'.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP002211 Genomic DNA. Translation: AER84314.1.
RefSeqYP_006148938.1. NC_017651.1.

3D structure databases

ProteinModelPortalG7R5K5.
SMRG7R5K5. Positions 27-489.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAER84314; AER84314; i02_1744.
GeneID12669510.
KEGGeld:i02_1744.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycECOL885276:GJE7-1756-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
InterProIPR010107. Glutamate_decarboxylase.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR021115. Pyridoxal-P_BS.
[Graphical view]
PANTHERPTHR11999:SF1. PTHR11999:SF1. 1 hit.
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR01788. Glu-decarb-GAD. 1 hit.
PROSITEPS00392. DDC_GAD_HDC_YDC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG7R5K5_ECOC2
AccessionPrimary (citable) accession number: G7R5K5
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: October 16, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)