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G7QR46

- G7QR46_MYCBI

UniProt

G7QR46 - G7QR46_MYCBI

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

ligC

Organism
Mycobacterium bovis BCG str. Mexico
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (25 Jan 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciMBOV717522:GJXR-3838-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ligCImported
    ORF Names:BCGMEX_3792Imported
    OrganismiMycobacterium bovis BCG str. MexicoImported
    Taxonomic identifieri717522 [NCBI]
    Taxonomic lineageiBacteriaActinobacteriaActinobacteridaeActinomycetalesCorynebacterineaeMycobacteriaceaeMycobacteriumMycobacterium tuberculosis complex
    ProteomesiUP000005881: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG7QR46.
    SMRiG7QR46. Positions 6-340.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G7QR46-1 [UniParc]FASTAAdd to Basket

    « Hide

    MQLPVMPPVS PMLAKSVTAI PPDASYEPKW DGFRSICFRD GDQVELGSRN    50
    ERPMTRYFPE LVAAIRAELP HRCVIDGEII IATDHGLDFE ALQQRIHPAE 100
    SRVRMLADRT PASFIAFDLL ALGDDDYTGR PFSERRAALV DAVTGSGADA 150
    DLSIHVTPAT TDMATAQRWF SEFEGAGLDG VIAKPPHITY QPDKRVMFKI 200
    KHLRTADCVV AGYRVHKSGS DAIGSLLLGL YQEDGQLASV GVIGAFPMAE 250
    RRRLLTELQP LVTSFDDHPW NWAAHVAGQR TPRKNEFSRW NVGKDLSFVP 300
    LRPERVVEVR YDHMEGARFR HTAQFNRWRP DRDPRSCSYA QLERPLTVSL 350
    SDIVPGLR 358
    Length:358
    Mass (Da):40,141
    Last modified:January 25, 2012 - v1
    Checksum:i22DA33D1A56196BD
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002095 Genomic DNA. Translation: AET21060.1.
    RefSeqiYP_005173243.1. NC_016804.1.

    Genome annotation databases

    EnsemblBacteriaiAET21060; AET21060; BCGMEX_3792.
    GeneIDi11812105.
    KEGGimbm:BCGMEX_3792.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002095 Genomic DNA. Translation: AET21060.1 .
    RefSeqi YP_005173243.1. NC_016804.1.

    3D structure databases

    ProteinModelPortali G7QR46.
    SMRi G7QR46. Positions 6-340.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AET21060 ; AET21060 ; BCGMEX_3792 .
    GeneIDi 11812105.
    KEGGi mbm:BCGMEX_3792.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci MBOV717522:GJXR-3838-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Genomic and proteomic analyses of Mycobacterium bovis BCG Mexico 1931 reveal a diverse immunogenic repertoire against tuberculosis infection."
      Orduna P., Cevallos M.A., de Leon S.P., Arvizu A., Hernandez-Gonzalez I.L., Mendoza-Hernandez G., Lopez-Vidal Y.
      BMC Genomics 12:493-493(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: MexicoImported.

    Entry informationi

    Entry nameiG7QR46_MYCBI
    AccessioniPrimary (citable) accession number: G7QR46
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 25, 2012
    Last sequence update: January 25, 2012
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3