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G7JYN3 (G7JYN3_MEDTR) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length543 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 14 family. RuleBase RU004157

Ontologies

Gene Ontology (GO)
   Biological_processpolysaccharide catabolic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionbeta-amylase activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G7JYN3 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: 965BEF41C03A8D99

FASTA54360,680
        10         20         30         40         50         60 
MALTLRSSIS FIHKKETRVL KSLDDFSSNK VSCPKFKPLF HLKAKSSMQE THFTKENTNS 

        70         80         90        100        110        120 
AVKENKKREK VLAPSIAHNH DADSTRVPVF VMLPLDTVTM GGKLNKARAM NASLMALKSA 

       130        140        150        160        170        180 
GVEGVMVDAW WGLVEKDGPM KYNWEAYAEL VQMVQKHGLK LQIVMSFHQC GGNVGDSCSI 

       190        200        210        220        230        240 
PLPPWVLEEI RKNPELVYTD KLGRRNPEYI SLGCDSVPVL AGRTPLQVYS DYMRSFRDRF 

       250        260        270        280        290        300 
TDYLGNVIIE IQVGLGPCGE LRYPSYPETD GTWKFPGIGE FQCYDKYMRS SLEASAAAIG 

       310        320        330        340        350        360 
KKEWGTGGPH DSGQYNQFPE DTGFFKREGT WNTEYGDFFL DWYSSKLVEH GEKILVSAKS 

       370        380        390        400        410        420 
IFQTSGVKLS AKIAGIHWHY NARSHATELT AGYYNTRFHD GYIPIAQMLA KHGVILNFTC 

       430        440        450        460        470        480 
MEMKDNEQPG HANCSPEGLV NQVKMATKIA GGELAGENAL ERYDSSAYGQ VLSTSGLSAF 

       490        500        510        520        530        540 
TYLRINKRLL EGENWRQFVD FVVSMSDGGK PRLSKSDSYG TDLYVGHIKG IKESEVIIEI 


ALV 

« Hide

References

[1]"The Medicago genome provides insight into the evolution of rhizobial symbioses."
Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K., Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S., Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S., Krishnakumar V. expand/collapse author list , Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D., Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S., Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A., Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R., Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S., Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J., Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y., Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S., Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L., Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R., Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E., Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T., Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R., Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X., Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B., Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A., Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F., Town C.D., Roe B.A.
Nature 480:520-524(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: A17 EMBL AES94367.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM001221 Genomic DNA. Translation: AES94367.1.
RefSeqXP_003611409.1. XM_003611361.1.
UniGeneMtr.11922.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID11439428.
KEGGmtr:MTR_5g013640.

Phylogenomic databases

KOK01177.

Family and domain databases

Gene3D3.20.20.80. 1 hit.
InterProIPR001554. Glyco_hydro_14.
IPR018238. Glyco_hydro_14_CS.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PfamPF01373. Glyco_hydro_14. 1 hit.
[Graphical view]
PRINTSPR00750. BETAAMYLASE.
SUPFAMSSF51445. SSF51445. 1 hit.
PROSITEPS00506. BETA_AMYLASE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG7JYN3_MEDTR
AccessionPrimary (citable) accession number: G7JYN3
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: February 19, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)