G7JVD4 (G7JVD4_MEDTR) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Ribulose bisphosphate carboxylase small chain RuleBase RU003627
EC=4.1.1.39 RuleBase RU003627

Gene names

ORF Names:

MTR_4g127870 EMBL AES92293.1

Organism

Medicago truncatula (Barrel medic) (Medicago tribuloides) EMBL AES92293.1

Taxonomic identifier

3880 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Viridiplantae › Streptophyta › Streptophytina › Embryophyta › Tracheophyta › Euphyllophyta › Spermatophyta › Magnoliophyta › eudicotyledons › core eudicotyledons › rosids › fabids › Fabales › Fabaceae › Papilionoideae › Trifolieae › Medicago

Protein attributes

Sequence length	98 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	RuBisCO catalyzes two reactions: the carboxylation of D-ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site By similarity. RuleBase RU003627 SAAS SAAS000894
Catalytic activity	2 3-phospho-D-glycerate + 2 H+ = D-ribulose 1,5-bisphosphate + CO2 + H2O. RuleBase RU003627 SAAS SAAS000894 3-phospho-D-glycerate + 2-phosphoglycolate = D-ribulose 1,5-bisphosphate + O2. RuleBase RU003627 SAAS SAAS000894
Subunit structure	8 large chains + 8 small chains By similarity. RuleBase RU003627 SAAS SAAS000894
Sequence similarities	Belongs to the RuBisCO small chain family. RuleBase RU003627

Ontologies

Keywords
Biological process	Carbon dioxide fixation RuleBase RU003627 SAAS SAAS000894 Photorespiration RuleBase RU003627 Photosynthesis RuleBase RU003627 SAAS SAAS000894
Cellular component	Plastid RuleBase RU003627
Molecular function	Lyase RuleBase RU003627 SAAS SAAS000894 Monooxygenase RuleBase RU003627 SAAS SAAS000894 Oxidoreductase
Gene Ontology (GO)
Biological_process	carbon fixation Inferred from electronic annotation. Source: UniProtKB-KW photorespiration Inferred from electronic annotation. Source: UniProtKB-KW photosynthesis Inferred from electronic annotation. Source: UniProtKB-KW
Cellular_component	plastid Inferred from electronic annotation. Source: UniProtKB-KW
Molecular_function	monooxygenase activity Inferred from electronic annotation. Source: UniProtKB-KW ribulose-bisphosphate carboxylase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G7JVD4 [UniParc]. Last modified January 25, 2012. Version 1. Checksum: 2F3F7742E10EB9FD	FASTA	98	10,963
	10 20 30 40 50 60 MSAGTFAAPV AGPGFVGLKS NSSSLWPSAT YSIEWKKKTV SNGSKIHCMK TWNPINNKKF 70 80 90 ETLSYLPPLS DDSIAKEIDY MLKKRWTPCL EFDEVRST

References

[1]

"The Medicago genome provides insight into the evolution of rhizobial symbioses." Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K., Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S., Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S., Krishnakumar V. , Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D., Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S., Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A., Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R., Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S., Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J., Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y., Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S., Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L., Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R., Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E., Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T., Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R., Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X., Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B., Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A., Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F., Town C.D., Roe B.A. Nature 0:0-0(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: A17 EMBL AES92293.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CM001220 Genomic DNA. Translation: AES92293.1.
RefSeq	XP_003610096.1. XM_003610048.1.
UniGene	Mtr.11361.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	11446762.
KEGG	mtr:MTR_4g127870.
Phylogenomic databases
KO	K01602.
Family and domain databases
Gene3D	3.30.190.10. 1 hit.
InterPro	IPR024681. RuBisCO_sc. IPR000894. RuBisCO_sc_dom. [Graphical view]
Pfam	PF00101. RuBisCO_small. 1 hit. [Graphical view]
PRINTS	PR00152. RUBISCOSMALL.
SUPFAM	SSF55239. RuBisCO_small. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G7JVD4_MEDTR

Accession

Primary (citable) accession number: G7JVD4

Entry history

Integrated into UniProtKB/TrEMBL:	January 25, 2012
Last sequence update:	January 25, 2012
Last modified:	March 6, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)