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G7JKX4 (G7JKX4_MEDTR) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length430 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

Hydrolysis of an N(6)-acetyl-lysine residue of a histone to yield a deacetylated histone. PIRNR PIRNR037913

Subcellular location

Nucleus By similarity PIRNR PIRNR037913.

Sequence similarities

Belongs to the histone deacetylase family. HD Type 1 subfamily. PIRNR PIRNR037913

Sequences

Sequence LengthMass (Da)Tools
G7JKX4 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: 82D792DA31E80FD6

FASTA43049,081
        10         20         30         40         50         60 
MRSKDRISYF YDGDVGSVYF GPNHPMKPHR LCMTHHLVLS YDLHKKMEVY RPHKAYPVEL 

        70         80         90        100        110        120 
AQFHSADYVE FLHRITPDTQ HLFSDELAKY NLGEDCPVFD NLFEFCQMYA GGTIDAARRL 

       130        140        150        160        170        180 
NNKLCDIAIN WAGGLHHAKK CEASGFCYIN DLVLGILELL KHHPRVLYID IDVHHGDGVE 

       190        200        210        220        230        240 
EAFYFTDRVM TVSSHKYGDL FFPGTGDAKE IGEREGKFYA INVPLKDGID DSSFTRLFKT 

       250        260        270        280        290        300 
IISKVVETYQ PGAIVLQCGA DSLAGDRLGC FNLSIDGHAE CVRFVKKFNV PLLVTGGGGY 

       310        320        330        340        350        360 
TKENVARCWT VETGVLLDTE LPNEIPENDY IKYFGPDFSL KIPNGFIENL NSKSYLSTIK 

       370        380        390        400        410        420 
MQVMENLRCI QHAPSVQMQE VPPDFYIPDI DEDLQNPDER NDQHTQDKHI QRDDEYYDGD 

       430 
NDNDHQMDLP 

« Hide

References

[1]"The Medicago genome provides insight into the evolution of rhizobial symbioses."
Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K., Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S., Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S., Krishnakumar V. expand/collapse author list , Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D., Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S., Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A., Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R., Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S., Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J., Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y., Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S., Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L., Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R., Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E., Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T., Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R., Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X., Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B., Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A., Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F., Town C.D., Roe B.A.
Nature 480:520-524(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: A17 EMBL AES88434.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM001220 Genomic DNA. Translation: AES88434.1.
RefSeqXP_003606237.1. XM_003606189.1.
UniGeneMtr.10577.

3D structure databases

ProteinModelPortalG7JKX4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID11446252.
KEGGmtr:MTR_4g055080.

Phylogenomic databases

KOK06067.
OMAGDVGNVY.

Family and domain databases

Gene3D3.40.800.20. 1 hit.
InterProIPR000286. His_deacetylse.
IPR003084. His_deacetylse_1.
IPR023801. His_deacetylse_dom.
[Graphical view]
PANTHERPTHR10625. PTHR10625. 1 hit.
PfamPF00850. Hist_deacetyl. 1 hit.
[Graphical view]
PIRSFPIRSF037913. His_deacetylse_1. 1 hit.
PRINTSPR01270. HDASUPER.
PR01271. HISDACETLASE.
ProtoNetSearch...

Entry information

Entry nameG7JKX4_MEDTR
AccessionPrimary (citable) accession number: G7JKX4
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: May 14, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)