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Protein

Alpha-amylase

Gene

11419190

Organism
Medicago truncatula (Barrel medic) (Medicago tribuloides)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Catalytic activityi

Endohydrolysis of (1->4)-alpha-D-glucosidic linkages in polysaccharides containing three or more (1->4)-alpha-linked D-glucose units.UniRule annotation

Cofactori

Ca2+UniRule annotation

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Active sitei201NucleophileUniRule annotation1
Active sitei226Proton donorUniRule annotation1

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionGlycosidaseUniRule annotation, Hydrolase
Biological processCarbohydrate metabolismUniRule annotation

Protein family/group databases

CAZyiGH13 Glycoside Hydrolase Family 13

Names & Taxonomyi

Protein namesi
Recommended name:
Alpha-amylaseUniRule annotation (EC:3.2.1.1UniRule annotation)
Alternative name(s):
1,4-alpha-D-glucan glucanohydrolaseUniRule annotation
Gene namesi
Name:11419190Imported
Ordered Locus Names:MTR_1g019440Imported
OrganismiMedicago truncatula (Barrel medic) (Medicago tribuloides)Imported
Taxonomic identifieri3880 [NCBI]
Taxonomic lineageiEukaryotaViridiplantaeStreptophytaEmbryophytaTracheophytaSpermatophytaMagnoliophytaeudicotyledonsGunneridaePentapetalaerosidsfabidsFabalesFabaceaePapilionoideaeTrifolieaeMedicago
Proteomesi
  • UP000002051 Componenti: Chromosome 1

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 21UniRule annotationAdd BLAST21
ChainiPRO_501089787922 – 421Alpha-amylaseUniRule annotationAdd BLAST400

Expressioni

Gene expression databases

ExpressionAtlasiG7I3K2 differential

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini24 – 361AamyInterPro annotationAdd BLAST338
Domaini362 – 421Alpha-amyl_C2InterPro annotationAdd BLAST60

Sequence similaritiesi

Belongs to the glycosyl hydrolase 13 family.UniRule annotation

Keywords - Domaini

SignalUniRule annotation

Phylogenomic databases

KOiK01176
OMAiVLNHKMG
OrthoDBiEOG093600FS

Family and domain databases

Gene3Di2.60.40.1180, 1 hit
InterProiView protein in InterPro
IPR012850 A-amylase_bs_C
IPR013775 A-amylase_pln
IPR006046 Alpha_amylase
IPR006047 Glyco_hydro_13_cat_dom
IPR013780 Glyco_hydro_b
IPR017853 Glycoside_hydrolase_SF
PfamiView protein in Pfam
PF07821 Alpha-amyl_C2, 1 hit
PF00128 Alpha-amylase, 1 hit
PIRSFiPIRSF001028 Alph-amls_plant, 1 hit
PRINTSiPR00110 ALPHAAMYLASE
SMARTiView protein in SMART
SM00642 Aamy, 1 hit
SM00810 Alpha-amyl_C2, 1 hit
SUPFAMiSSF51445 SSF51445, 1 hit

Sequencei

Sequence statusi: Complete.

G7I3K2-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSLPWLSLF CFCLSIFPLL ASSTLLFQGF NWESSNKGGW YNSLKNLIPD
60 70 80 90 100
LANAGITHVW LPPPSQSVGP QGYLPGRLYD LDASKYGSKD DLKSLIAAFK
110 120 130 140 150
DKGINCLADI VINHRTAERK DDRGIYCLFE GGTPDSKLDW GPSFICKDDT
160 170 180 190 200
AYSDGTGNLD SGEGYQAAPD IDHLNPQVQK ELSEWMNWLK TEIGFSGWRF
210 220 230 240 250
DFVKGYAPSI TKIYMENTSP DFAVGEYWNS LSYGQDGKLN YNQDAARGEL
260 270 280 290 300
VNWVENGGGV VNAFDFTTKG ILQAAVQGEL WRLKDSNGKP PGLIGIKPEN
310 320 330 340 350
GATFIDNHDT GSTQKLWPFP SDKVMQGYAY ILTHPGTPSI FYDHFFDWGL
360 370 380 390 400
KDQIAKLTAI RQRNGINMKS TVNILAADAD LYVAKIDNKI IVKIGPRMDL
410 420
GNLIPSNFHV ATSGQDYAVW E
Length:421
Mass (Da):46,715
Last modified:January 25, 2012 - v1
Checksum:iC62A20D01A979CD2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CM001217 Genomic DNA Translation: AES59437.1
RefSeqiXP_003589186.1, XM_003589138.2

Genome annotation databases

EnsemblPlantsiAES59437; AES59437; MTR_1g019440
GeneIDi11419190
GrameneiAES59437; AES59437; MTR_1g019440
KEGGimtr:MTR_1g019440

Similar proteinsi

Entry informationi

Entry nameiG7I3K2_MEDTR
AccessioniPrimary (citable) accession number: G7I3K2
Entry historyiIntegrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: March 28, 2018
This is version 45 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported
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Main funding by: National Institutes of Health