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G7I3K2 (G7I3K2_MEDTR) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length421 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 13 family. RuleBase RU003615

Sequences

Sequence LengthMass (Da)Tools
G7I3K2 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: C62A20D01A979CD2

FASTA42146,715
        10         20         30         40         50         60 
MNSLPWLSLF CFCLSIFPLL ASSTLLFQGF NWESSNKGGW YNSLKNLIPD LANAGITHVW 

        70         80         90        100        110        120 
LPPPSQSVGP QGYLPGRLYD LDASKYGSKD DLKSLIAAFK DKGINCLADI VINHRTAERK 

       130        140        150        160        170        180 
DDRGIYCLFE GGTPDSKLDW GPSFICKDDT AYSDGTGNLD SGEGYQAAPD IDHLNPQVQK 

       190        200        210        220        230        240 
ELSEWMNWLK TEIGFSGWRF DFVKGYAPSI TKIYMENTSP DFAVGEYWNS LSYGQDGKLN 

       250        260        270        280        290        300 
YNQDAARGEL VNWVENGGGV VNAFDFTTKG ILQAAVQGEL WRLKDSNGKP PGLIGIKPEN 

       310        320        330        340        350        360 
GATFIDNHDT GSTQKLWPFP SDKVMQGYAY ILTHPGTPSI FYDHFFDWGL KDQIAKLTAI 

       370        380        390        400        410        420 
RQRNGINMKS TVNILAADAD LYVAKIDNKI IVKIGPRMDL GNLIPSNFHV ATSGQDYAVW 


E 

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References

[1]"The Medicago genome provides insight into the evolution of rhizobial symbioses."
Young N.D., Debelle F., Oldroyd G.E., Geurts R., Cannon S.B., Udvardi M.K., Benedito V.A., Mayer K.F., Gouzy J., Schoof H., Van de Peer Y., Proost S., Cook D.R., Meyers B.C., Spannagl M., Cheung F., De Mita S., Krishnakumar V. expand/collapse author list , Gundlach H., Zhou S., Mudge J., Bharti A.K., Murray J.D., Naoumkina M.A., Rosen B., Silverstein K.A., Tang H., Rombauts S., Zhao P.X., Zhou P., Barbe V., Bardou P., Bechner M., Bellec A., Berger A., Berges H., Bidwell S., Bisseling T., Choisne N., Couloux A., Denny R., Deshpande S., Dai X., Doyle J.J., Dudez A.M., Farmer A.D., Fouteau S., Franken C., Gibelin C., Gish J., Goldstein S., Gonzalez A.J., Green P.J., Hallab A., Hartog M., Hua A., Humphray S.J., Jeong D.H., Jing Y., Jocker A., Kenton S.M., Kim D.J., Klee K., Lai H., Lang C., Lin S., Macmil S.L., Magdelenat G., Matthews L., McCorrison J., Monaghan E.L., Mun J.H., Najar F.Z., Nicholson C., Noirot C., O'Bleness M., Paule C.R., Poulain J., Prion F., Qin B., Qu C., Retzel E.F., Riddle C., Sallet E., Samain S., Samson N., Sanders I., Saurat O., Scarpelli C., Schiex T., Segurens B., Severin A.J., Sherrier D.J., Shi R., Sims S., Singer S.R., Sinharoy S., Sterck L., Viollet A., Wang B.B., Wang K., Wang M., Wang X., Warfsmann J., Weissenbach J., White D.D., White J.D., Wiley G.B., Wincker P., Xing Y., Yang L., Yao Z., Ying F., Zhai J., Zhou L., Zuber A., Denarie J., Dixon R.A., May G.D., Schwartz D.C., Rogers J., Quetier F., Town C.D., Roe B.A.
Nature 480:520-524(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: A17 EMBL AES59437.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CM001217 Genomic DNA. Translation: AES59437.1.
RefSeqXP_003589186.1. XM_003589138.1.
UniGeneMtr.2667.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID11419190.
KEGGmtr:MTR_1g019440.

Phylogenomic databases

KOK01176.

Family and domain databases

Gene3D2.60.40.1180. 1 hit.
3.20.20.80. 1 hit.
InterProIPR012850. A-amylase_bs_C.
IPR013775. A-amylase_pln.
IPR006046. Alpha_amylase.
IPR015902. Glyco_hydro_13.
IPR013780. Glyco_hydro_13_b.
IPR006047. Glyco_hydro_13_cat_dom.
IPR006589. Glyco_hydro_13_sub_cat_dom.
IPR013781. Glyco_hydro_catalytic_dom.
IPR017853. Glycoside_hydrolase_SF.
[Graphical view]
PANTHERPTHR10357. PTHR10357. 1 hit.
PfamPF07821. Alpha-amyl_C2. 1 hit.
PF00128. Alpha-amylase. 1 hit.
[Graphical view]
PIRSFPIRSF001028. Alph-amls_plant. 1 hit.
PRINTSPR00110. ALPHAAMYLASE.
SMARTSM00642. Aamy. 1 hit.
SM00810. Alpha-amyl_C2. 1 hit.
[Graphical view]
SUPFAMSSF51445. SSF51445. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG7I3K2_MEDTR
AccessionPrimary (citable) accession number: G7I3K2
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: February 19, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)