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G7DPB2

- G7DPB2_BRAJP

UniProt

G7DPB2 - G7DPB2_BRAJP

Protein
Submitted name:

ATP-dependent DNA ligase

Gene

BJ6T_11730

Organism
Bradyrhizobium japonicum USDA 6
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (25 Jan 2012)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA binding Source: InterPro
    3. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA ligation involved in DNA repair Source: InterPro
    2. DNA recombination Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBJAP1037409:GL9L-1172-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    ATP-dependent DNA ligaseImported
    Gene namesi
    ORF Names:BJ6T_11730Imported
    OrganismiBradyrhizobium japonicum USDA 6Imported
    Taxonomic identifieri1037409 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
    ProteomesiUP000005663: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
    PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G7DPB2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MNRFAELLDR LAYEPGRNNK LRLITGYFRE VGDPDRGYAL AALTGALSFK    50
    HAKPALIRDL IASRTDEVLF GLSYDYVGDL SETVALMWPK AAMAAHNNPP 100
    PPTLTDVVTT LRTLGKTELP KQLERWLDEL DETGRWALLK LVTGALRIGI 150
    SARLAKTAAA ALGDKDPHEV ELIWPGLSPP YLDLFAWLER RGEKPVNRDP 200
    APFRPVMLAH AIEDTDFAAL DPADYVAEWK WDGIRVQAVA GRDERGQITA 250
    RLYSRTGEDI TGSFPDLVPS LRLAGAIDGE LLILREGRVQ SFNVLQQRLN 300
    RKVVSPKLIK EFPIHLRAYD LLGDDANDLR ELPFAERRER LETFIGKLDD 350
    PRIDLSPTVP FASWQALTAA RADPASAGAG ADADAVEGVM LKRRDAPYLP 400
    GRPKGQWWKW KRDPHIIDAV LMYAQRGHGK RSSYYSDYTF GVWTAGEAGD 450
    ELVPVGKAYF GFTDEELLQI DRFVRRNTTE KFGPVRHVVH ERDKGLVLEV 500
    AFEGLQRSPR HKSGVAMRFP RISRLRWDKP PREADRLETL ENMLKADESL 550
    PTIKVAASAD SH 562
    Length:562
    Mass (Da):63,089
    Last modified:January 25, 2012 - v1
    Checksum:iA07226B97E6F1423
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012206 Genomic DNA. Translation: BAL06464.1.
    RefSeqiWP_014491346.1. NC_017249.1.
    YP_005606052.1. NC_017249.1.

    Genome annotation databases

    EnsemblBacteriaiBAL06464; BAL06464; BJ6T_11730.
    GeneIDi12144272.
    KEGGibju:BJ6T_11730.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012206 Genomic DNA. Translation: BAL06464.1 .
    RefSeqi WP_014491346.1. NC_017249.1.
    YP_005606052.1. NC_017249.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAL06464 ; BAL06464 ; BJ6T_11730 .
    GeneIDi 12144272.
    KEGGi bju:BJ6T_11730.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci BJAP1037409:GL9L-1172-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
    IPR012309. DNA_ligase_ATP-dep_C.
    IPR012310. DNA_ligase_ATP-dep_cent.
    IPR016059. DNA_ligase_ATP-dep_CS.
    IPR012308. DNA_ligase_ATP-dep_N.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF04679. DNA_ligase_A_C. 1 hit.
    PF01068. DNA_ligase_A_M. 1 hit.
    PF04675. DNA_ligase_A_N. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
    PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
    PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T."
      Kaneko T., Maita S., Hirakawa H., Uchiike N., Minamisawa K., Watanabe A., Sato S.
      Genes (Basel) 2:763-787(2011)
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: USDA 6Imported.

    Entry informationi

    Entry nameiG7DPB2_BRAJP
    AccessioniPrimary (citable) accession number: G7DPB2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 25, 2012
    Last sequence update: January 25, 2012
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3