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G7DPB2

- G7DPB2_BRAJP

UniProt

G7DPB2 - G7DPB2_BRAJP

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene
BJ6T_11730
Organism
Bradyrhizobium japonicum USDA 6
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBJAP1037409:GL9L-1172-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
ORF Names:BJ6T_11730Imported
OrganismiBradyrhizobium japonicum USDA 6Imported
Taxonomic identifieri1037409 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000005663: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G7DPB2-1 [UniParc]FASTAAdd to Basket

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MNRFAELLDR LAYEPGRNNK LRLITGYFRE VGDPDRGYAL AALTGALSFK    50
HAKPALIRDL IASRTDEVLF GLSYDYVGDL SETVALMWPK AAMAAHNNPP 100
PPTLTDVVTT LRTLGKTELP KQLERWLDEL DETGRWALLK LVTGALRIGI 150
SARLAKTAAA ALGDKDPHEV ELIWPGLSPP YLDLFAWLER RGEKPVNRDP 200
APFRPVMLAH AIEDTDFAAL DPADYVAEWK WDGIRVQAVA GRDERGQITA 250
RLYSRTGEDI TGSFPDLVPS LRLAGAIDGE LLILREGRVQ SFNVLQQRLN 300
RKVVSPKLIK EFPIHLRAYD LLGDDANDLR ELPFAERRER LETFIGKLDD 350
PRIDLSPTVP FASWQALTAA RADPASAGAG ADADAVEGVM LKRRDAPYLP 400
GRPKGQWWKW KRDPHIIDAV LMYAQRGHGK RSSYYSDYTF GVWTAGEAGD 450
ELVPVGKAYF GFTDEELLQI DRFVRRNTTE KFGPVRHVVH ERDKGLVLEV 500
AFEGLQRSPR HKSGVAMRFP RISRLRWDKP PREADRLETL ENMLKADESL 550
PTIKVAASAD SH 562
Length:562
Mass (Da):63,089
Last modified:January 25, 2012 - v1
Checksum:iA07226B97E6F1423
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012206 Genomic DNA. Translation: BAL06464.1.
RefSeqiWP_014491346.1. NC_017249.1.
YP_005606052.1. NC_017249.1.

Genome annotation databases

EnsemblBacteriaiBAL06464; BAL06464; BJ6T_11730.
GeneIDi12144272.
KEGGibju:BJ6T_11730.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012206 Genomic DNA. Translation: BAL06464.1 .
RefSeqi WP_014491346.1. NC_017249.1.
YP_005606052.1. NC_017249.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAL06464 ; BAL06464 ; BJ6T_11730 .
GeneIDi 12144272.
KEGGi bju:BJ6T_11730.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci BJAP1037409:GL9L-1172-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T."
    Kaneko T., Maita S., Hirakawa H., Uchiike N., Minamisawa K., Watanabe A., Sato S.
    Genes (Basel) 2:763-787(2011)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: USDA 6Imported.

Entry informationi

Entry nameiG7DPB2_BRAJP
AccessioniPrimary (citable) accession number: G7DPB2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: September 3, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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