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G7DPB2 (G7DPB2_BRAJP) Unreviewed, UniProtKB/TrEMBL

Last modified January 22, 2014. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:BJ6T_11730 EMBL BAL06464.1
OrganismBradyrhizobium japonicum USDA 6 [Complete proteome] EMBL BAL06464.1
Taxonomic identifier1037409 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium

Protein attributes

Sequence length562 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
G7DPB2 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: A07226B97E6F1423

FASTA56263,089
        10         20         30         40         50         60 
MNRFAELLDR LAYEPGRNNK LRLITGYFRE VGDPDRGYAL AALTGALSFK HAKPALIRDL 

        70         80         90        100        110        120 
IASRTDEVLF GLSYDYVGDL SETVALMWPK AAMAAHNNPP PPTLTDVVTT LRTLGKTELP 

       130        140        150        160        170        180 
KQLERWLDEL DETGRWALLK LVTGALRIGI SARLAKTAAA ALGDKDPHEV ELIWPGLSPP 

       190        200        210        220        230        240 
YLDLFAWLER RGEKPVNRDP APFRPVMLAH AIEDTDFAAL DPADYVAEWK WDGIRVQAVA 

       250        260        270        280        290        300 
GRDERGQITA RLYSRTGEDI TGSFPDLVPS LRLAGAIDGE LLILREGRVQ SFNVLQQRLN 

       310        320        330        340        350        360 
RKVVSPKLIK EFPIHLRAYD LLGDDANDLR ELPFAERRER LETFIGKLDD PRIDLSPTVP 

       370        380        390        400        410        420 
FASWQALTAA RADPASAGAG ADADAVEGVM LKRRDAPYLP GRPKGQWWKW KRDPHIIDAV 

       430        440        450        460        470        480 
LMYAQRGHGK RSSYYSDYTF GVWTAGEAGD ELVPVGKAYF GFTDEELLQI DRFVRRNTTE 

       490        500        510        520        530        540 
KFGPVRHVVH ERDKGLVLEV AFEGLQRSPR HKSGVAMRFP RISRLRWDKP PREADRLETL 

       550        560 
ENMLKADESL PTIKVAASAD SH 

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References

[1]"Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T."
Kaneko T., Maita S., Hirakawa H., Uchiike N., Minamisawa K., Watanabe A., Sato S.
Genes (Basel) 2:763-787(2011)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: USDA 6 EMBL BAL06464.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012206 Genomic DNA. Translation: BAL06464.1.
RefSeqYP_005606052.1. NC_017249.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAL06464; BAL06464; BJ6T_11730.
GeneID12144272.
KEGGbju:BJ6T_11730.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycBJAP1037409:GL9L-1172-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG7DPB2_BRAJP
AccessionPrimary (citable) accession number: G7DPB2
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: January 22, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)