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G7DPB2

- G7DPB2_BRAJP

UniProt

G7DPB2 - G7DPB2_BRAJP

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Protein
Submitted name:

ATP-dependent DNA ligase

Gene

BJ6T_11730

Organism
Bradyrhizobium japonicum USDA 6
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA binding Source: InterPro
  3. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA ligation involved in DNA repair Source: InterPro
  2. DNA recombination Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBJAP1037409:GL9L-1172-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
ATP-dependent DNA ligaseImported
Gene namesi
ORF Names:BJ6T_11730Imported
OrganismiBradyrhizobium japonicum USDA 6Imported
Taxonomic identifieri1037409 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000005663: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR04120. DNA_lig_bact. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G7DPB2 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MNRFAELLDR LAYEPGRNNK LRLITGYFRE VGDPDRGYAL AALTGALSFK
60 70 80 90 100
HAKPALIRDL IASRTDEVLF GLSYDYVGDL SETVALMWPK AAMAAHNNPP
110 120 130 140 150
PPTLTDVVTT LRTLGKTELP KQLERWLDEL DETGRWALLK LVTGALRIGI
160 170 180 190 200
SARLAKTAAA ALGDKDPHEV ELIWPGLSPP YLDLFAWLER RGEKPVNRDP
210 220 230 240 250
APFRPVMLAH AIEDTDFAAL DPADYVAEWK WDGIRVQAVA GRDERGQITA
260 270 280 290 300
RLYSRTGEDI TGSFPDLVPS LRLAGAIDGE LLILREGRVQ SFNVLQQRLN
310 320 330 340 350
RKVVSPKLIK EFPIHLRAYD LLGDDANDLR ELPFAERRER LETFIGKLDD
360 370 380 390 400
PRIDLSPTVP FASWQALTAA RADPASAGAG ADADAVEGVM LKRRDAPYLP
410 420 430 440 450
GRPKGQWWKW KRDPHIIDAV LMYAQRGHGK RSSYYSDYTF GVWTAGEAGD
460 470 480 490 500
ELVPVGKAYF GFTDEELLQI DRFVRRNTTE KFGPVRHVVH ERDKGLVLEV
510 520 530 540 550
AFEGLQRSPR HKSGVAMRFP RISRLRWDKP PREADRLETL ENMLKADESL
560
PTIKVAASAD SH
Length:562
Mass (Da):63,089
Last modified:January 25, 2012 - v1
Checksum:iA07226B97E6F1423
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012206 Genomic DNA. Translation: BAL06464.1.
RefSeqiWP_014491346.1. NZ_AXAV01000013.1.
YP_005606052.1. NC_017249.1.

Genome annotation databases

EnsemblBacteriaiBAL06464; BAL06464; BJ6T_11730.
GeneIDi12144272.
KEGGibju:BJ6T_11730.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012206 Genomic DNA. Translation: BAL06464.1 .
RefSeqi WP_014491346.1. NZ_AXAV01000013.1.
YP_005606052.1. NC_017249.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAL06464 ; BAL06464 ; BJ6T_11730 .
GeneIDi 12144272.
KEGGi bju:BJ6T_11730.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci BJAP1037409:GL9L-1172-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
TIGRFAMsi TIGR04120. DNA_lig_bact. 1 hit.
PROSITEi PS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T."
    Kaneko T., Maita S., Hirakawa H., Uchiike N., Minamisawa K., Watanabe A., Sato S.
    Genes (Basel) 2:763-787(2011)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: USDA 6Imported.

Entry informationi

Entry nameiG7DPB2_BRAJP
AccessioniPrimary (citable) accession number: G7DPB2
Entry historyi
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: October 29, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3