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G7DI05 (G7DI05_BRAJP) Unreviewed, UniProtKB/TrEMBL

Last modified February 19, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length425 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201 SAAS SAAS009006

Cofactor

Pyridoxal phosphate By similarity. SAAS SAAS009006 HAMAP-Rule MF_01201

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site591Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2781Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1571Substrate By similarity HAMAP-Rule MF_01201
Binding site3311Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue591N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
G7DI05 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: 2546D3881846A7BC

FASTA42544,825
        10         20         30         40         50         60 
MASDPKMIPQ SGLLSAEANQ AAALAAYGGV LTVDLDAIIA NWRKLEKTAV PAECSAVIKA 

        70         80         90        100        110        120 
DAYGCGAAQV SRALSKAGCK TFFVATIEEA RTVREAVPEA AIYVLGGYFQ NTGEHYAKIN 

       130        140        150        160        170        180 
CRPVIGDLNE LAEWDVFCRR TGWTGGAAVH IDTGMNRLGL TLADAQAIIP RINAGDHGIT 

       190        200        210        220        230        240 
LVMSHLVSAE QLNSPVNAKQ LATFRGIASE FSGVPAALAN SSGIFLGAPF QFDLVRPGAA 

       250        260        270        280        290        300 
LYGVNPTPEA DNPMQPVVDL KARIVQTRNV ERGETVGYGG TWTARRPTKL AIIAVGYADG 

       310        320        330        340        350        360 
YFRAASSNDG TRGAEVVVAG KRCPVAGRVS MDLIAIDITD LPPNAARRGH MVTLLGEGIT 

       370        380        390        400        410        420 
VDELAHHFGT IGYEVLTSLG RRYARVYKGG NEVEPLVKPE PPPTAEQPPS PPPIQQPASP 


PPLPS 

« Hide

References

[1]"Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T."
Kaneko T., Maita S., Hirakawa H., Uchiike N., Minamisawa K., Watanabe A., Sato S.
Genes (Basel) 2:763-787(2011)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: USDA 6 EMBL BAL10999.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012206 Genomic DNA. Translation: BAL10999.1.
RefSeqYP_005610587.1. NC_017249.1.

3D structure databases

ProteinModelPortalG7DI05.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAL10999; BAL10999; BJ6T_57440.
GeneID12143171.
KEGGbju:BJ6T_57440.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.

Enzyme and pathway databases

BioCycBJAP1037409:GL9L-5741-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR020622. Ala_racemase_pyridoxalP-BS.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
PROSITEPS00395. ALANINE_RACEMASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG7DI05_BRAJP
AccessionPrimary (citable) accession number: G7DI05
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: February 19, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)