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G7DI05

- G7DI05_BRAJP

UniProt

G7DI05 - G7DI05_BRAJP

Protein

Alanine racemase

Gene

BJ6T_57440

Organism
Bradyrhizobium japonicum USDA 6
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (25 Jan 2012)
      Previous versions | rss
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    • Comment

    Functioni

    Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.UniRule annotation

    Catalytic activityi

    L-alanine = D-alanine.UniRule annotationSAAS annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotationSAAS annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei59 – 591Proton acceptor; specific for D-alanineUniRule annotation
    Binding sitei157 – 1571SubstrateUniRule annotation
    Active sitei278 – 2781Proton acceptor; specific for L-alanineUniRule annotation
    Binding sitei331 – 3311Substrate; via amide nitrogenUniRule annotation

    GO - Molecular functioni

    1. alanine racemase activity Source: UniProtKB-HAMAP
    2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-alanine biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciBJAP1037409:GL9L-5741-MONOMER.
    UniPathwayiUPA00042; UER00497.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
    Gene namesi
    ORF Names:BJ6T_57440Imported
    OrganismiBradyrhizobium japonicum USDA 6Imported
    Taxonomic identifieri1037409 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
    ProteomesiUP000005663: Chromosome

    PTM / Processingi

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei59 – 591N6-(pyridoxal phosphate)lysineUniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliG7DI05.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the alanine racemase family.UniRule annotation

    Phylogenomic databases

    KOiK01775.

    Family and domain databases

    Gene3Di2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    HAMAPiMF_01201. Ala_racemase.
    InterProiIPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR020622. Ala_racemase_pyridoxalP-BS.
    IPR029066. PLP-binding_barrel.
    [Graphical view]
    PfamiPF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    [Graphical view]
    PRINTSiPR00992. ALARACEMASE.
    SMARTiSM01005. Ala_racemase_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    TIGRFAMsiTIGR00492. alr. 1 hit.
    PROSITEiPS00395. ALANINE_RACEMASE. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G7DI05-1 [UniParc]FASTAAdd to Basket

    « Hide

    MASDPKMIPQ SGLLSAEANQ AAALAAYGGV LTVDLDAIIA NWRKLEKTAV    50
    PAECSAVIKA DAYGCGAAQV SRALSKAGCK TFFVATIEEA RTVREAVPEA 100
    AIYVLGGYFQ NTGEHYAKIN CRPVIGDLNE LAEWDVFCRR TGWTGGAAVH 150
    IDTGMNRLGL TLADAQAIIP RINAGDHGIT LVMSHLVSAE QLNSPVNAKQ 200
    LATFRGIASE FSGVPAALAN SSGIFLGAPF QFDLVRPGAA LYGVNPTPEA 250
    DNPMQPVVDL KARIVQTRNV ERGETVGYGG TWTARRPTKL AIIAVGYADG 300
    YFRAASSNDG TRGAEVVVAG KRCPVAGRVS MDLIAIDITD LPPNAARRGH 350
    MVTLLGEGIT VDELAHHFGT IGYEVLTSLG RRYARVYKGG NEVEPLVKPE 400
    PPPTAEQPPS PPPIQQPASP PPLPS 425
    Length:425
    Mass (Da):44,825
    Last modified:January 25, 2012 - v1
    Checksum:i2546D3881846A7BC
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012206 Genomic DNA. Translation: BAL10999.1.
    RefSeqiWP_014495815.1. NC_017249.1.
    YP_005610587.1. NC_017249.1.

    Genome annotation databases

    EnsemblBacteriaiBAL10999; BAL10999; BJ6T_57440.
    GeneIDi12143171.
    KEGGibju:BJ6T_57440.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012206 Genomic DNA. Translation: BAL10999.1 .
    RefSeqi WP_014495815.1. NC_017249.1.
    YP_005610587.1. NC_017249.1.

    3D structure databases

    ProteinModelPortali G7DI05.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAL10999 ; BAL10999 ; BJ6T_57440 .
    GeneIDi 12143171.
    KEGGi bju:BJ6T_57440.

    Phylogenomic databases

    KOi K01775.

    Enzyme and pathway databases

    UniPathwayi UPA00042 ; UER00497 .
    BioCyci BJAP1037409:GL9L-5741-MONOMER.

    Family and domain databases

    Gene3Di 2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    HAMAPi MF_01201. Ala_racemase.
    InterProi IPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR020622. Ala_racemase_pyridoxalP-BS.
    IPR029066. PLP-binding_barrel.
    [Graphical view ]
    Pfami PF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00992. ALARACEMASE.
    SMARTi SM01005. Ala_racemase_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    TIGRFAMsi TIGR00492. alr. 1 hit.
    PROSITEi PS00395. ALANINE_RACEMASE. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T."
      Kaneko T., Maita S., Hirakawa H., Uchiike N., Minamisawa K., Watanabe A., Sato S.
      Genes (Basel) 2:763-787(2011)
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: USDA 6Imported.

    Entry informationi

    Entry nameiG7DI05_BRAJP
    AccessioniPrimary (citable) accession number: G7DI05
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 25, 2012
    Last sequence update: January 25, 2012
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3