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G7DHI3 (G7DHI3_BRAJP) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:BJ6T_31410 EMBL BAL08416.1
OrganismBradyrhizobium japonicum USDA 6 [Complete proteome] EMBL BAL08416.1
Taxonomic identifier1037409 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium

Protein attributes

Sequence length339 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G7DHI3 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: CB9C93D66F53BD66

FASTA33937,902
        10         20         30         40         50         60 
MQLMEAESVA QLPRGAQWQY EPKWDGFRCL LIRERSRVSM QSKSGRDLVR YFPEIAAAAA 

        70         80         90        100        110        120 
ALSPKTLTLD GELIIELDEG YSFDALLQRI HPAASRVKHL AKETPATFMV FDLLRSGARD 

       130        140        150        160        170        180 
LSGLPLMKRR AALETLAGKA FQASGLFRLT PASRNYADAE AWLNSVNEDH DGVVAKRLDL 

       190        200        210        220        230        240 
PYRGGTRDGM QKIKLLRSAD CVVGGFRYAE RKQGNRKVVG SLLLGLYDKG GLLHHVGFTS 

       250        260        270        280        290        300 
GIRSSDRLAL TDRLEKIVGL QSFTGNSPGG PSRWSTKRSA EWKAVRPTFV VEVSYDHVTG 

       310        320        330 
DRFRHGTKVI RWRPDKKPSQ CRMDQLRQRA ATQTFRAAT 

« Hide

References

[1]"Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T."
Kaneko T., Maita S., Hirakawa H., Uchiike N., Minamisawa K., Watanabe A., Sato S.
Genes (Basel) 2:763-787(2011)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: USDA 6 EMBL BAL08416.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012206 Genomic DNA. Translation: BAL08416.1.
RefSeqYP_005608004.1. NC_017249.1.

3D structure databases

ProteinModelPortalG7DHI3.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAL08416; BAL08416; BJ6T_31410.
GeneID12145104.
KEGGbju:BJ6T_31410.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycBJAP1037409:GL9L-3138-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG7DHI3_BRAJP
AccessionPrimary (citable) accession number: G7DHI3
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)