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G7DDW0

- G7DDW0_BRAJP

UniProt

G7DDW0 - G7DDW0_BRAJP

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Protein
Submitted name: D-alanine--D-alanine ligase B
Gene
BJ6T_28280
Organism
Bradyrhizobium japonicum USDA 6
Status
Unreviewed - Annotation score: 2 out of 5 - Protein inferred from homologyi

Functioni

Cell wall formation By similarity.SAAS annotations

Catalytic activityi

ATP + 2 D-alanine = ADP + phosphate + D-alanyl-D-alanine.SAAS annotations

Cofactori

Binds 2 magnesium or manganese ions per subunit By similarity.SAAS annotations

Pathwayi

GO - Molecular functioni

  1. ATP binding Source: UniProtKB-KW
  2. D-alanine-D-alanine ligase activity Source: InterPro
  3. metal ion binding Source: UniProtKB-KW
Complete GO annotation...

GO - Biological processi

  1. peptidoglycan biosynthetic process Source: UniProtKB-UniPathway
  2. regulation of cell shape Source: UniProtKB-KW
Complete GO annotation...

Keywords - Molecular functioni

LigaseSAAS annotationsImported

Keywords - Biological processi

Cell shape, Cell wall biogenesis/degradationSAAS annotations, Peptidoglycan synthesisSAAS annotations

Keywords - Ligandi

ATP-bindingSAAS annotations, MagnesiumSAAS annotations, ManganeseSAAS annotations, Metal-bindingSAAS annotations, Nucleotide-binding

Enzyme and pathway databases

BioCyciBJAP1037409:GL9L-2825-MONOMER.
UniPathwayiUPA00219.

Names & Taxonomyi

Protein namesi
Submitted name:
D-alanine--D-alanine ligase BImported
Gene namesi
ORF Names:BJ6T_28280Imported
OrganismiBradyrhizobium japonicum USDA 6Imported
Taxonomic identifieri1037409 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000005663: Chromosome

Subcellular locationi

Cytoplasm By similarity SAAS annotations

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmSAAS annotations

Family & Domainsi

Sequence similaritiesi

Contains ATP-grasp domain.SAAS annotations

Phylogenomic databases

KOiK01921.

Family and domain databases

Gene3Di3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
3.40.50.20. 1 hit.
InterProiIPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR011127. Dala_Dala_lig_N.
IPR016185. PreATP-grasp_dom.
[Graphical view]
PANTHERiPTHR23132. PTHR23132. 1 hit.
PfamiPF07478. Dala_Dala_lig_C. 1 hit.
PF01820. Dala_Dala_lig_N. 1 hit.
[Graphical view]
SUPFAMiSSF52440. SSF52440. 1 hit.
PROSITEiPS50975. ATP_GRASP. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G7DDW0-1 [UniParc]FASTAAdd to Basket

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MRITILFGGS NRERLVSVAS AQALHQALPE ADLWWWDVED KVHVVQSKQL    50
LEHARPFEDE FKPGTSGIPL GQALDRAKTE GRVLVLGLHG GRAENGELQV 100
MCEARGVPFT GSGSASSHLA FDKIAAKHFA ALGGVTPPAN VALDEIDEAF 150
AEYGRLIAKP ARDGSSYGLI FVNARQDLVA VRNAAKHEDY VIEPYIAGVE 200
ATCGVLERTD GSIISLPPIE IIPGEGNFDY AAKYLLKSTQ EICPGRFAPE 250
ITAALKEQAM LAHRAMSCTG YSRSDFIVSD RGLIYLETNT LPGLTKSSLY 300
PKALKAEGIE FVDFLRGLVE LAGRDVRK 328
Length:328
Mass (Da):35,577
Last modified:January 25, 2012 - v1
Checksum:i8BE21D8D1ED4E931
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012206 Genomic DNA. Translation: BAL08106.1.
RefSeqiYP_005607694.1. NC_017249.1.

Genome annotation databases

EnsemblBacteriaiBAL08106; BAL08106; BJ6T_28280.
GeneIDi12144791.
KEGGibju:BJ6T_28280.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP012206 Genomic DNA. Translation: BAL08106.1 .
RefSeqi YP_005607694.1. NC_017249.1.

3D structure databases

ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAL08106 ; BAL08106 ; BJ6T_28280 .
GeneIDi 12144791.
KEGGi bju:BJ6T_28280.

Phylogenomic databases

KOi K01921.

Enzyme and pathway databases

UniPathwayi UPA00219 .
BioCyci BJAP1037409:GL9L-2825-MONOMER.

Family and domain databases

Gene3Di 3.30.1490.20. 1 hit.
3.30.470.20. 2 hits.
3.40.50.20. 1 hit.
InterProi IPR011761. ATP-grasp.
IPR013815. ATP_grasp_subdomain_1.
IPR013816. ATP_grasp_subdomain_2.
IPR005905. D_ala_D_ala.
IPR011095. Dala_Dala_lig_C.
IPR011127. Dala_Dala_lig_N.
IPR016185. PreATP-grasp_dom.
[Graphical view ]
PANTHERi PTHR23132. PTHR23132. 1 hit.
Pfami PF07478. Dala_Dala_lig_C. 1 hit.
PF01820. Dala_Dala_lig_N. 1 hit.
[Graphical view ]
SUPFAMi SSF52440. SSF52440. 1 hit.
PROSITEi PS50975. ATP_GRASP. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T."
    Kaneko T., Maita S., Hirakawa H., Uchiike N., Minamisawa K., Watanabe A., Sato S.
    Genes (Basel) 2:763-787(2011)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: USDA 6Imported.

Entry informationi

Entry nameiG7DDW0_BRAJP
AccessioniPrimary (citable) accession number: G7DDW0
Entry historyi
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: September 3, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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