Skip Header

You are using a version of Internet Explorer that may not display all features of this website. Please upgrade to a modern browser.
Contribute Send feedback
Read comments (?) or add your own

G7DBZ5 (G7DBZ5_BRAJP) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·Ontologies·Sequences·References·Cross-refs·Entry infoCustomize order

Names and origin

Protein names
Gene names
ORF Names:BJ6T_26450 EMBL BAL07923.1
OrganismBradyrhizobium japonicum USDA 6 [Complete proteome] EMBL BAL07923.1
Taxonomic identifier1037409 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium

Protein attributes

Sequence length888 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G7DBZ5 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: 9F493359F8288E88

FASTA88897,626
        10         20         30         40         50         60 
MLRKLSTYRQ KRDFEKTPEP SGKTAVAPSA QRRFVIQKHD ATRLHYDLRL EFDGVFKSWA 

        70         80         90        100        110        120 
VTKGPSLDPH DKRLAVEVED HPLDYGDFEG TIPEGQYGGG TVMLWDRGTW ESEDPERGFQ 

       130        140        150        160        170        180 
KGDLKFTLHG DKLHGSWVLV RMRHDRNGGK RTNWLLIKHR DEYASESDDI LSEDKSVASG 

       190        200        210        220        230        240 
RAMAEIADGK GRAPKPFMLA KGAKAKADAV WQSNRAEEPK GRTVRPAPGA ALKRGTGAKT 

       250        260        270        280        290        300 
KATTATNAKK VSEMPDFVAP QLCTPVERPP AADGWCHEIK FDGYRVQLRV EDGEATLKTR 

       310        320        330        340        350        360 
KGLDWTDKFA AIAKEAGELP DVMIDGEIVA LDHNGAPNFS SLQAALSDGK TEDLIFFAFD 

       370        380        390        400        410        420 
LLFAEGLDCR RLPLGERKDR LRQLLDAGKR KSSQIRYVEH FESSGDAVLQ SACKLELEGV 

       430        440        450        460        470        480 
VSKKLDAPYR SGRTESWTKA KCRAGHEVVI GGWKTTNGKF RSLMAGVHRG DHLAFVGMVG 

       490        500        510        520        530        540 
TGFGADTVKR IMPSLKAMEA GQSPFGGKNA PKKTRDVHWL KPELVAEIEF AGFTADGNIR 

       550        560        570        580        590        600 
QAAFKGLRQD KPAEEVEAET PADTELAKPS ARKRAVPSAG KRKDAGTAEV MGVVISKPDK 

       610        620        630        640        650        660 
ELWPDGGDGE GVTKLDLARY FEAVGAWMIE HIKGRPCSIL RAPDGIGGEK FFQRHAMQGT 

       670        680        690        700        710        720 
SNLLELAKVS GDRKPYLQID RVEGLAAVAQ IGGVELHPWN CAPDAYDTPG RLVFDLDPAP 

       730        740        750        760        770        780 
DVKFADVVDA AKEMRQRLSD VGMESFCKTT GGKGLHVVVP LLHGARDKVS WKEAKAFAQG 

       790        800        810        820        830        840 
VCQWMADDDP ERYLLNMSKK LRNGKIFLDY LRNDRLSTAV APLSPRARDG ATVSMPVTWA 

       850        860        870        880 
QVKGDLDPKR YTVRTVPGLL ARSKAWDGYD DAAISIKAAA KKLAGKKK 

« Hide

References

[1]"Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T."
Kaneko T., Maita S., Hirakawa H., Uchiike N., Minamisawa K., Watanabe A., Sato S.
Genes (Basel) 2:763-787(2011)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: USDA 6 EMBL BAL07923.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AP012206 Genomic DNA. Translation: BAL07923.1.
RefSeqYP_005607511.1. NC_017249.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaBAL07923; BAL07923; BJ6T_26450.
GeneID12144608.
KEGGbju:BJ6T_26450.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycBJAP1037409:GL9L-2642-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014144. LigD_PE_domain.
IPR014145. LigD_pol.
IPR012340. NA-bd_OB-fold.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF13298. LigD_N. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR02777. LigD_PE_dom. 1 hit.
TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG7DBZ5_BRAJP
AccessionPrimary (citable) accession number: G7DBZ5
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)