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Protein
Submitted name:

Uncharacterized protein

Gene

BJ6T_19970

Organism
Bradyrhizobium japonicum USDA 6
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciBJAP1037409:GL9L-1994-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Uncharacterized proteinImported
Gene namesi
ORF Names:BJ6T_19970Imported
OrganismiBradyrhizobium japonicum USDA 6Imported
Taxonomic identifieri1037409 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000005663 Componenti: Chromosome

Interactioni

Protein-protein interaction databases

STRINGi1037409.BJ6T_19970.

Structurei

3D structure databases

ProteinModelPortaliG7D608.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G7D608-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSRTSTLPKR LQPMLATLTD APFDDPDWVF EDKYDGFRMI AEIRRGKVAL
60 70 80 90 100
YSRNGKIISR SYIEVAKALE GVKGDAVIDG ELVAIGKDGI SHFQLLQNAL
110 120 130 140 150
RHEAKLLYCA FDLMFENAVD LRGEPLLERK KRLKAILPRN KLIAFSAHRK
160 170 180 190 200
GNGTKFFTEA ERKGLEGIMA KRADSSYASG SRTSDWLKIK TAKRQEVVIA
210 220 230 240 250
GFTAPKRTRP FFGALVLAVR EDDAWRYIGH VGTGFSHKAL EDLHAKLLKL
260 270 280 290 300
RASKSPFPAK VKDEAATTWV RPSLVAEVKF AEWTGNGELR QPVYLGLRSD
310
KRAKDVVRER ERLRK
Length:315
Mass (Da):35,570
Last modified:January 25, 2012 - v1
Checksum:i3F2C93B1855E876E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012206 Genomic DNA. Translation: BAL07276.1.
RefSeqiWP_014492145.1. NZ_AXAV01000010.1.
YP_005606864.1. NC_017249.1.

Genome annotation databases

EnsemblBacteriaiBAL07276; BAL07276; BJ6T_19970.
KEGGibju:BJ6T_19970.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012206 Genomic DNA. Translation: BAL07276.1.
RefSeqiWP_014492145.1. NZ_AXAV01000010.1.
YP_005606864.1. NC_017249.1.

3D structure databases

ProteinModelPortaliG7D608.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi1037409.BJ6T_19970.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAL07276; BAL07276; BJ6T_19970.
KEGGibju:BJ6T_19970.

Enzyme and pathway databases

BioCyciBJAP1037409:GL9L-1994-MONOMER.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR014146. LigD_ligase_dom.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.
TIGRFAMsiTIGR02779. NHEJ_ligase_lig. 1 hit.
PROSITEiPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T."
    Kaneko T., Maita S., Hirakawa H., Uchiike N., Minamisawa K., Watanabe A., Sato S.
    Genes (Basel) 2:763-787(2011)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: USDA 6Imported.

Entry informationi

Entry nameiG7D608_BRAJP
AccessioniPrimary (citable) accession number: G7D608
Entry historyi
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: June 24, 2015
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.