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Protein

Phosphoenolpyruvate carboxylase

Gene

ppc

Organism
Bradyrhizobium japonicum USDA 6
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.UniRule annotation

Catalytic activityi

Phosphate + oxaloacetate = H2O + phosphoenolpyruvate + HCO3-.UniRule annotationSAAS annotation

Cofactori

Mg2+UniRule annotationSAAS annotation

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei164 – 1641UniRule annotation
Active sitei594 – 5941UniRule annotation

GO - Molecular functioni

  1. magnesium ion binding Source: UniProtKB-HAMAP
  2. phosphoenolpyruvate carboxylase activity Source: UniProtKB-HAMAP

GO - Biological processi

  1. carbon fixation Source: UniProtKB-HAMAP
  2. oxaloacetate metabolic process Source: UniProtKB-HAMAP
  3. tricarboxylic acid cycle Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotationSAAS annotation

Keywords - Biological processi

Carbon dioxide fixationUniRule annotationSAAS annotation

Keywords - Ligandi

MagnesiumUniRule annotationSAAS annotation

Enzyme and pathway databases

BioCyciBJAP1037409:GL9L-6807-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Phosphoenolpyruvate carboxylaseUniRule annotationSAAS annotation (EC:4.1.1.31UniRule annotationSAAS annotation)
Short name:
PEPCUniRule annotation
Short name:
PEPCaseUniRule annotation
Gene namesi
Name:ppcUniRule annotation
ORF Names:BJ6T_68100Imported
OrganismiBradyrhizobium japonicum USDA 6Imported
Taxonomic identifieri1037409 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesBradyrhizobiaceaeBradyrhizobium
ProteomesiUP000005663: Chromosome

Interactioni

Subunit structurei

Homotetramer.UniRule annotation

Family & Domainsi

Sequence similaritiesi

Belongs to the PEPCase type 1 family.UniRule annotation

Phylogenomic databases

KOiK01595.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G7D418-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSLQTVPPDA IDNRANRAED AQALEADARL RDDIRLLGRI LGDTVRDQEG
60 70 80 90 100
AELFDLVERI RQTSIRFHRD EDRLARRELE QILDSMSTSE TVRIVRAFSY
110 120 130 140 150
FSHLANIAED QNNIRQMRAR SAAQSTGSGV LAETLAHARD AGIRPDVLRN
160 170 180 190 200
FFKTALVSPV LTAHPTEVRR KSTMDREMEV ASLLDRRERV ALTADEAAAS
210 220 230 240 250
DEQLRREVLT LWQTNLLRRT KLTVLDEVAN GLSFYDYTFL REVPRLVNML
260 270 280 290 300
EDRLEEAGEA AASELASFLR MGSWIGGDRD GNPFVTADVM RGTLRLQSSR
310 320 330 340 350
VMQFYLNELH VLGSELSIAA HLADVSEELR TLAERSPDTS PHRSGEPYRL
360 370 380 390 400
AVSGIYARLT ATAEKLEVEI TRRPVGKGRP YETVRELQAD LDVLHRSLIS
410 420 430 440 450
NNARVIARGR LRLLRRAVDC FGFHLARLDI RQNSAVHERT IAELMDAANP
460 470 480 490 500
GMSYLALGED ARISLLTNEL RSTRSLVSPF VKYSDETMGE LNVFHSAAEA
510 520 530 540 550
HAKFGSDAIP QCIISMCKGM SDMLEVAVLL KEVGLVHPSG RSAINIVPLF
560 570 580 590 600
ETIEDLQASS AIMDRMLSLH DYRRLVDSRG SVQEVMLGYS DSNKDGGFVT
610 620 630 640 650
SGWELYKAEI GLVDVFERHG VRLRLFHGRG GSVGRGGGPS YDAIIAQPGG
660 670 680 690 700
AVNGQIRITE QGEIISSKYS NAEVGRNNLE ILAAATLEAS LLHPRQSAPR
710 720 730 740 750
REYLTAMDEL SNLAFKAYRG LVYETDGFVD YFWASTVINE IATLNIGSRP
760 770 780 790 800
ASRKKTRAIE DLRAIPWVFS WAQCRLMLPG WYGFGSAVEQ WIAEHPDKGM
810 820 830 840 850
PFLKELYREW PFFRMLLSNM DMVLAKSSIA IASRYAELVP DEALREKIFS
860 870 880 890 900
RIRREWHSCI ETLLDIMGQD RLLQGNPLLE RSVRHRFPYL DPLNHVQVEL
910 920 930
LKEHRAQNPD EQVLRGIQLT INGISAGLRN TG
Length:932
Mass (Da):104,703
Last modified:January 25, 2012 - v1
Checksum:iBE26909E480ED4F0
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012206 Genomic DNA. Translation: BAL12059.1.
RefSeqiYP_005611647.1. NC_017249.1.

Genome annotation databases

EnsemblBacteriaiBAL12059; BAL12059; BJ6T_68100.
GeneIDi12146184.
KEGGibju:BJ6T_68100.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP012206 Genomic DNA. Translation: BAL12059.1.
RefSeqiYP_005611647.1. NC_017249.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAL12059; BAL12059; BJ6T_68100.
GeneIDi12146184.
KEGGibju:BJ6T_68100.

Phylogenomic databases

KOiK01595.

Enzyme and pathway databases

BioCyciBJAP1037409:GL9L-6807-MONOMER.

Family and domain databases

HAMAPiMF_00595. PEPcase_type1.
InterProiIPR021135. PEP_COase.
IPR018129. PEP_COase_AS.
IPR022805. PEP_COase_bac/pln-type.
IPR015813. Pyrv/PenolPyrv_Kinase-like_dom.
[Graphical view]
PfamiPF00311. PEPcase. 1 hit.
[Graphical view]
PRINTSiPR00150. PEPCARBXLASE.
SUPFAMiSSF51621. SSF51621. 1 hit.
PROSITEiPS00781. PEPCASE_1. 1 hit.
PS00393. PEPCASE_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Complete Genome Sequence of the Soybean Symbiont Bradyrhizobium japonicum Strain USDA6T."
    Kaneko T., Maita S., Hirakawa H., Uchiike N., Minamisawa K., Watanabe A., Sato S.
    Genes (Basel) 2:763-787(2011)
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: USDA 6Imported.

Entry informationi

Entry nameiG7D418_BRAJP
AccessioniPrimary (citable) accession number: G7D418
Entry historyi
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: March 4, 2015
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.