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G7B0E0 (G7B0E0_VIBCL) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.7.6.5 EMBL EHH92039.1
Gene names
Name:relA EMBL EHH92039.1
ORF Names:VCHC32A1_2784 EMBL EHH92039.1
OrganismVibrio cholerae HC-32A1 EMBL EHH92039.1
Taxonomic identifier991956 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaVibrionalesVibrionaceaeVibrio

Protein attributes

Sequence length738 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance By similarity. RuleBase RU003847

Sequence similarities

Belongs to the relA/spoT family. RuleBase RU003847

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EHH92039.1

Sequences

Sequence LengthMass (Da)Tools
G7B0E0 [UniParc].

Last modified January 25, 2012. Version 1.
Checksum: 3C0EF2B3910F691F

FASTA73883,566
        10         20         30         40         50         60 
MVAVRSAHLN PDQQFELETW IASLTQEGKT AAKLTAVYRD CEQLLAGNPQ GPLLLWRGRE 

        70         80         90        100        110        120 
MIEILITLSM DRPTLVAALL FPIATSGVLD NESLEEGYGR EVVKLIHGVE EMAAIGQLNV 

       130        140        150        160        170        180 
TMHGSEASAQ VDNVRRMLLA MVDDFRCVVI KLAERICNLR EVKNEPDEVR RVAAKECANI 

       190        200        210        220        230        240 
YAPLANRLGI GQLKWEIEDY AFRYQQPDTY KQIAKQLSER RIVREQYIRD FVSDLRAEMK 

       250        260        270        280        290        300 
QSGINAEVSG RPKHIYSIWR KMQKKSLAFD ELFDVRAVRI IADKLQDCYA ALGIVHTKYK 

       310        320        330        340        350        360 
HLPNEFDDYV ANPKPNGYQS IHTVILGPEG KTIEIQIRTK QMHEESELGV AAHWKYKEGS 

       370        380        390        400        410        420 
SAARSGYDEK ITWLRKLLDW QEEMSDSGEM LDELRSQVFD DRVYAFTPKG DVVDLPMGAT 

       430        440        450        460        470        480 
PLDFAYHIHS EVGHRCIGAK VAGRIVPFTH KLQMGDQVEI ITAKEPNPSR DWLNPSLGFV 

       490        500        510        520        530        540 
HSGRARAKIN AWFRKQSREK NLEAGREILE IELAKIGANL KHAEAYALKR FNVNSVDEMY 

       550        560        570        580        590        600 
VGIGSGDLRI NQIVNHINAL VNKPTAEEED KLALEKLQEN KTLTPNRPHK DAVVVEGVDN 

       610        620        630        640        650        660 
LMTHLARCCQ PIPGDEIRGY ITQGRGISVH RSDCEQLEEL SLHAPERIID TVWGSGFVGS 

       670        680        690        700        710        720 
YLLTVRVEAM ERSGLLKDIT TLLANEKVKV ASMKSRSDYK RQIIIMDFDL EVNNVEALAR 

       730 
VSKRIEQIKD VMLVKRLG 

« Hide

References

[1]"Genome sequence of Vibrio Cholerae HC-32A1."
Eppinger M., Hasan N.A., Sengamalay N., Hine E., Su Q., Daugherty S.C., Young S., Sadzewicz L., Tallon L., Cebula T.A., Ravel J., Colwell R.R.
Submitted (OCT-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: HC-32A1 EMBL EHH92039.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AGUO01000056 Genomic DNA. Translation: EHH92039.1.

3D structure databases

ProteinModelPortalG7B0E0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaEHH92039; EHH92039; VCHC32A1_2784.

Family and domain databases

Gene3D3.10.20.30. 1 hit.
InterProIPR002912. ACT_dom.
IPR012675. Beta-grasp_dom.
IPR004811. RelA/Spo_fam.
IPR007685. RelA_SpoT.
IPR004095. TGS.
IPR012676. TGS-like.
[Graphical view]
PfamPF04607. RelA_SpoT. 1 hit.
PF02824. TGS. 1 hit.
[Graphical view]
SMARTSM00954. RelA_SpoT. 1 hit.
[Graphical view]
SUPFAMSSF81271. SSF81271. 1 hit.
TIGRFAMsTIGR00691. spoT_relA. 1 hit.
PROSITEPS51671. ACT. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG7B0E0_VIBCL
AccessionPrimary (citable) accession number: G7B0E0
Entry history
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: May 14, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)