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G5YCR0

- G5YCR0_ECOLX

UniProt

G5YCR0 - G5YCR0_ECOLX

Protein

Exodeoxyribonuclease 7 small subunit

Gene

xseB

Organism
Escherichia coli O104:H4 str. 11-4632 C5
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
  1. Functioni

    Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.UniRule annotationSAAS annotation

    Catalytic activityi

    Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotation
    Exonucleolytic cleavage in either 5'- to 3'-or 3'- to 5'-direction to yield nucleoside 5'-phosphates.SAAS annotation

    GO - Molecular functioni

    1. exodeoxyribonuclease VII activity Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    ExonucleaseUniRule annotationSAAS annotation, Hydrolase, Nuclease

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Exodeoxyribonuclease 7 small subunitUniRule annotation (EC:3.1.11.6UniRule annotation)
    Alternative name(s):
    Exodeoxyribonuclease VII small subunitUniRule annotation
    Gene namesi
    Name:xseBUniRule annotation
    ORF Names:EUOG_00728Imported
    OrganismiEscherichia coli O104:H4 str. 11-4632 C5Imported
    Taxonomic identifieri1068621 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

    Subcellular locationi

    Cytoplasm UniRule annotationSAAS annotation

    GO - Cellular componenti

    1. cytoplasm Source: UniProtKB-SubCell
    2. exodeoxyribonuclease VII complex Source: InterPro

    Keywords - Cellular componenti

    CytoplasmUniRule annotationSAAS annotation

    Interactioni

    Subunit structurei

    Heterooligomer composed of large and small subunits.UniRule annotationSAAS annotation

    Structurei

    3D structure databases

    ProteinModelPortaliG5YCR0.
    SMRiG5YCR0. Positions 8-66.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the XseB family.UniRule annotation

    Phylogenomic databases

    OMAiRQGQVKL.

    Family and domain databases

    Gene3Di1.10.287.1040. 1 hit.
    HAMAPiMF_00337. Exonuc_7_S.
    InterProiIPR003761. Exonuc_VII_S.
    [Graphical view]
    PfamiPF02609. Exonuc_VII_S. 1 hit.
    [Graphical view]
    PIRSFiPIRSF006488. Exonuc_VII_S. 1 hit.
    ProDomiPD028235. Exonuc_VII_S. 1 hit.
    [Graphical view] [Entries sharing at least one domain]
    TIGRFAMsiTIGR01280. xseB. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    G5YCR0-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPKKNEAPAS FEKALSELEQ IVTRLESGDL PLEEALNEFE RGVQLARQGQ   50
    AKLQQAEQRV QILLSDNEDA SLTPFTPDNE 80
    Length:80
    Mass (Da):8,952
    Last modified:January 25, 2012 - v1
    Checksum:i8B10380D442CADF4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AFVE01000025 Genomic DNA. Translation: EHF78682.1.

    Genome annotation databases

    EnsemblBacteriaiEHF78682; EHF78682; EUOG_00728.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AFVE01000025 Genomic DNA. Translation: EHF78682.1 .

    3D structure databases

    ProteinModelPortali G5YCR0.
    SMRi G5YCR0. Positions 8-66.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai EHF78682 ; EHF78682 ; EUOG_00728 .

    Phylogenomic databases

    OMAi RQGQVKL.

    Family and domain databases

    Gene3Di 1.10.287.1040. 1 hit.
    HAMAPi MF_00337. Exonuc_7_S.
    InterProi IPR003761. Exonuc_VII_S.
    [Graphical view ]
    Pfami PF02609. Exonuc_VII_S. 1 hit.
    [Graphical view ]
    PIRSFi PIRSF006488. Exonuc_VII_S. 1 hit.
    ProDomi PD028235. Exonuc_VII_S. 1 hit.
    [Graphical view ] [Entries sharing at least one domain ]
    TIGRFAMsi TIGR01280. xseB. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE.
      Strain: 11-4632 C5Imported.

    Entry informationi

    Entry nameiG5YCR0_ECOLX
    AccessioniPrimary (citable) accession number: G5YCR0
    Entry historyi
    Integrated into UniProtKB/TrEMBL: January 25, 2012
    Last sequence update: January 25, 2012
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Caution

    The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

    External Data

    Dasty 3