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G5YCR0

- G5YCR0_ECOLX

UniProt

G5YCR0 - G5YCR0_ECOLX

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Protein

Exodeoxyribonuclease 7 small subunit

Gene

xseB

Organism
Escherichia coli O104:H4 str. 11-4632 C5
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi

Functioni

Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides.UniRule annotationSAAS annotation

Catalytic activityi

Exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield nucleoside 5'-phosphates.UniRule annotation
Exonucleolytic cleavage in either 5'- to 3'-or 3'- to 5'-direction to yield nucleoside 5'-phosphates.SAAS annotation

GO - Molecular functioni

  1. exodeoxyribonuclease VII activity Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

ExonucleaseUniRule annotationSAAS annotation, Hydrolase, Nuclease

Names & Taxonomyi

Protein namesi
Recommended name:
Exodeoxyribonuclease 7 small subunitUniRule annotation (EC:3.1.11.6UniRule annotation)
Alternative name(s):
Exodeoxyribonuclease VII small subunitUniRule annotation
Gene namesi
Name:xseBUniRule annotation
ORF Names:EUOG_00728Imported
OrganismiEscherichia coli O104:H4 str. 11-4632 C5Imported
Taxonomic identifieri1068621 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Subcellular locationi

Cytoplasm UniRule annotationSAAS annotation

GO - Cellular componenti

  1. cytoplasm Source: UniProtKB-SubCell
  2. exodeoxyribonuclease VII complex Source: InterPro
Complete GO annotation...

Keywords - Cellular componenti

CytoplasmUniRule annotationSAAS annotation

Interactioni

Subunit structurei

Heterooligomer composed of large and small subunits.UniRule annotationSAAS annotation

Structurei

3D structure databases

ProteinModelPortaliG5YCR0.
SMRiG5YCR0. Positions 8-66.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the XseB family.UniRule annotation

Phylogenomic databases

OMAiRQGQVKL.

Family and domain databases

Gene3Di1.10.287.1040. 1 hit.
HAMAPiMF_00337. Exonuc_7_S.
InterProiIPR003761. Exonuc_VII_S.
[Graphical view]
PfamiPF02609. Exonuc_VII_S. 1 hit.
[Graphical view]
PIRSFiPIRSF006488. Exonuc_VII_S. 1 hit.
ProDomiPD028235. Exonuc_VII_S. 1 hit.
[Graphical view] [Entries sharing at least one domain]
TIGRFAMsiTIGR01280. xseB. 1 hit.

Sequencei

Sequence statusi: Complete.

G5YCR0-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MPKKNEAPAS FEKALSELEQ IVTRLESGDL PLEEALNEFE RGVQLARQGQ
60 70 80
AKLQQAEQRV QILLSDNEDA SLTPFTPDNE
Length:80
Mass (Da):8,952
Last modified:January 25, 2012 - v1
Checksum:i8B10380D442CADF4
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AFVE01000025 Genomic DNA. Translation: EHF78682.1.

Genome annotation databases

EnsemblBacteriaiEHF78682; EHF78682; EUOG_00728.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AFVE01000025 Genomic DNA. Translation: EHF78682.1 .

3D structure databases

ProteinModelPortali G5YCR0.
SMRi G5YCR0. Positions 8-66.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai EHF78682 ; EHF78682 ; EUOG_00728 .

Phylogenomic databases

OMAi RQGQVKL.

Family and domain databases

Gene3Di 1.10.287.1040. 1 hit.
HAMAPi MF_00337. Exonuc_7_S.
InterProi IPR003761. Exonuc_VII_S.
[Graphical view ]
Pfami PF02609. Exonuc_VII_S. 1 hit.
[Graphical view ]
PIRSFi PIRSF006488. Exonuc_VII_S. 1 hit.
ProDomi PD028235. Exonuc_VII_S. 1 hit.
[Graphical view ] [Entries sharing at least one domain ]
TIGRFAMsi TIGR01280. xseB. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE.
    Strain: 11-4632 C5Imported.

Entry informationi

Entry nameiG5YCR0_ECOLX
AccessioniPrimary (citable) accession number: G5YCR0
Entry historyi
Integrated into UniProtKB/TrEMBL: January 25, 2012
Last sequence update: January 25, 2012
Last modified: October 1, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.Imported

External Data

Dasty 3