G5GUZ8 (G5GUZ8_FUSNP) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative integrase core domain protein EMBL EHG19365.1

Gene names

ORF Names:

HMPREF9369_00942 EMBL EHG19365.1

Organism

Fusobacterium nucleatum subsp. polymorphum F0401 EMBL EHG19365.1

Taxonomic identifier

693991 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Fusobacteria › Fusobacteriia › Fusobacteriales › Fusobacteriaceae › Fusobacterium › Fusobacterium nucleatum › Fusobacterium nucleatum subsp. polymorphum

Protein attributes

Sequence length	619 AA.
Sequence status	Complete.
Protein existence	Predicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL EHG19365.1

Ontologies

Gene Ontology (GO)
Biological_process	DNA integration Inferred from electronic annotation. Source: InterPro
Molecular_function	nucleic acid binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G5GUZ8 [UniParc]. Last modified January 25, 2012. Version 1. Checksum: 19D6A188088FF970	FASTA	619	72,352
	10 20 30 40 50 60 MTKEYLLEDL QRLFEKTRTQ ALRFAQLQGW TVEKKKIGKV YKNVYKASEI DAYISSLVEV 70 80 90 100 110 120 KEEKEKKVAT RTVVKKEATA IDELPGWNQR VANARFIICM KLEEKYEEGG DSKEEIIKKF 130 140 150 160 170 180 VNDANRNYPQ QMEILKKLTV PTLRRWWGIY LKNKHNPLAL ASGHGTTKGI RRVEKEVLEF 190 200 210 220 230 240 AKMLYFSKNK PKISFVFERV VAMFGVKAIS YGTLRNYLNK DINLIEKDKA RMGNKEFKDT 250 260 270 280 290 300 YTPFIERSYE DIKAGEVWMS DGHDLEMMCY QGDKKKSNGD RYFGSPKLIV WIDVKSRFIV 310 320 330 340 350 360 GWSLAWSETT EAIAIALKRG IEKYGVPQHL YTDNGKAYKS KVLKGTDELD GIYASLGINV 370 380 390 400 410 420 DHARAYNAQA KHIERWFVDF KESFTKQFAT YKGGNIIERP EHLRSFAMQK LDKGEILEQW 430 440 450 460 470 480 ELEELIEKFI ETKNHNYYAL RRAAGLKAHR GRGMNNRTPL EVFQEENPLA NRKMLSDQEL 490 500 510 520 530 540 RLLFLYEEIR TIKQNGIEFM GNTYVNEYLY YHQTEKCKIK YDPHDLSYIF VYQETGEFLC 550 560 570 580 590 600 KAEQLGLAGW KDVTAIKTHK KRLQKISKLS KEIMGIREDI RDDLDLIDAT IVEDTKAIEN 610 KKKNEKERIL IGEGIYLED

References

[1]

"The Genome Sequence of Fusobacterium nucleatum subsp. polymorphum F0401." The Broad Institute Genome Sequencing Platform Earl A., Ward D., Feldgarden M., Gevers D., Izard J., Ganesan A., Blanton J.M., Baranova O.V., Ann Y.W., Finegold S., Dewhirst F.E., Young S.K., Zeng Q., Gargeya S., Fitzgerald M., Haas B., Abouelleil A., Alvarado L. , Arachchi H.M., Berlin A., Brown A., Chapman S.B., Chen Z., Dunbar C., Freedman E., Gearin G., Gellesch M., Goldberg J., Griggs A., Gujja S., Heiman D., Howarth C., Larson L., Lui A., MacDonald P.J.P., Montmayeur A., Murphy C., Neiman D., Pearson M., Priest M., Roberts A., Saif S., Shea T., Shenoy N., Sisk P., Stolte C., Sykes S., Wortman J., Nusbaum C., Birren B. Submitted (AUG-2011) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: F0401 EMBL EHG19365.1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	ADDB01000003 Genomic DNA. Translation: EHG19365.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	EHG19365; EHG19365; HMPREF9369_00942.
Family and domain databases
Gene3D	2.30.30.130. 1 hit.
InterPro	IPR001584. Integrase_cat-core. IPR012337. RNaseH-like_dom. IPR015378. Transposase-like_Mu_C. IPR009004. Transposase_Mu_C. [Graphical view]
Pfam	PF09299. Mu-transpos_C. 1 hit. PF00665. rve. 1 hit. [Graphical view]
SUPFAM	SSF53098. RNaseH_fold. 1 hit. SSF50610. Transposase-like_Mu_C. 1 hit.
PROSITE	PS50994. INTEGRASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G5GUZ8_FUSNP

Accession

Primary (citable) accession number: G5GUZ8

Entry history

Integrated into UniProtKB/TrEMBL:	January 25, 2012
Last sequence update:	January 25, 2012
Last modified:	April 3, 2013
This is version 6 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)