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Protein
Submitted name:

USO1 (Yeast transport protein) homolog

Gene

uso-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 3 out of 5-Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

ReactomeiR-CEL-6807878. COPI-mediated anterograde transport.

Names & Taxonomyi

Protein namesi
Submitted name:
USO1 (Yeast transport protein) homologImported
Gene namesi
Name:uso-1Imported
ORF Names:CELE_K09B11.9Imported, K09B11.9Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
Proteomesi
  • UP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiK09B11.9a; CE38393; WBGene00010713; uso-1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Proteomic databases

EPDiG5EGG0.
PaxDbiG5EGG0.

Expressioni

Gene expression databases

ExpressionAtlasiG5EGG0. baseline and differential.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
C09G1.4Q178654EBI-311986,EBI-317562
C16B8.3Q180433EBI-311986,EBI-315071
cnt-2Q9XX143EBI-311986,EBI-330314
dsh-1H2KZ172EBI-311986,EBI-2923230
eif-3.DP306422EBI-311986,EBI-311981
rsy-1Q9U2523EBI-311986,EBI-324871
unc-87P378063EBI-311986,EBI-319806
vab-3G5EDS13EBI-311986,EBI-319610
Y38H6C.14Q9XX473EBI-311986,EBI-330289

Protein-protein interaction databases

IntActiG5EGG0. 114 interactions.
STRINGi6239.K09B11.9a.

Structurei

3D structure databases

ProteinModelPortaliG5EGG0.
SMRiG5EGG0. Positions 87-696.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini412 – 696285Uso1_p115_headInterPro annotationAdd
BLAST
Domaini804 – 941138Uso1_p115_CInterPro annotationAdd
BLAST

Coiled coil

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Coiled coili711 – 76858Sequence analysisAdd
BLAST
Coiled coili847 – 88135Sequence analysisAdd
BLAST

Keywords - Domaini

Coiled coilSequence analysis

Phylogenomic databases

eggNOGiKOG0946. Eukaryota.
ENOG410XRCG. LUCA.
GeneTreeiENSGT00390000017018.
InParanoidiG5EGG0.
OMAiYGNEETE.
OrthoDBiEOG7K0ZBS.
PhylomeDBiG5EGG0.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR006955. Uso1_p115_C.
IPR024095. Vesicle_P115-like.
IPR006953. Vesicle_Uso1_P115_head.
[Graphical view]
PANTHERiPTHR10013. PTHR10013. 1 hit.
PfamiPF04871. Uso1_p115_C. 1 hit.
PF04869. Uso1_p115_head. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 2 hits.

Sequencei

Sequence statusi: Complete.

G5EGG0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFAYSTSSIT GSTLSVRSFS SDTTISNAFF NLPQSNFRQR LQAKKRSPKR
60 70 80 90 100
VSKRAPLRTH PPIPRQMSLF RNFFGGGQQD EDEDNGAEYV ETLVERAETC
110 120 130 140 150
TAPEDRRDAL RGLKGVAKKY RLAVGTMGMN AFIDVLETDR MNTEAMTIVL
160 170 180 190 200
DTMAIVLSTD DDSSESDELG ERLAEVMIKR KGFISSVLCA VEQFDIGVRR
210 220 230 240 250
TAIQLISNLL RHRGTEVQKA VMEHPQGIAK LVDVIHDNRE IIRNEAILMI
260 270 280 290 300
CELSRANSQV QQLLAYDNIF LDLLNIIETE PLDSIVIEDC MFVMLNLLRK
310 320 330 340 350
HAMNQQIFRE DQFVARLGKI LHTFLYGNEE TEDIEVTEWA KQRTANVIFL
360 370 380 390 400
LQIIRTLVSP DNTSENTHAA QKVLNQTKIL EELCRVLLSE IGASVEILTE
410 420 430 440 450
SIIVVAEAIR GNYTNQELFA NTVLDNGEDV PRTSLVVLLI SMTAEKQPYK
460 470 480 490 500
LRCAVFYCFL SYLFDNEFGK ARVIETLLPQ SHNSSSSLTT GALILQAISS
510 520 530 540 550
AESVQAWFGC VTLMHCLYDV DHLSEQLLRV NLTVVTEDPP LTLLNHVCQL
560 570 580 590 600
LVSTGNRRPQ TRAGLLMLLG TWLQNCPAAV SDFMAKDEHI QYLTTNLVDE
610 620 630 640 650
CGEGSESEQQ VLRGLMAFVL LSCLKNLQSK EARSSMEILI QRRVGKELIL
660 670 680 690 700
SALEGLSRTE QFVRAAQKQQ PTNELFLDFH FVKLFKSLEG TLAKQLKPNG
710 720 730 740 750
EFNGTSNDSI IQSYKELIKR QDGDIAQLKQ DNKRMSLEIE KLNAEVQNKQ
760 770 780 790 800
MEREVENLRV RLEESEAFKT QNEVLNSQLV ESQRLTQQWY AEAERYKQWA
810 820 830 840 850
QQWQAYQLAQ LPNGVETGLA QLQQQVNELE QQLGFGYQAF EQQSQTMLHY
860 870 880 890 900
TSENANLKDR LAKTEAALAE ANYKIEQLNL KPISNGIVVE HEPQADSEEF
910 920 930 940
SKLKQEQEEL LMLLADQHNK MSAYRRLLRN LKQPVTDDED E
Length:941
Mass (Da):106,853
Last modified:December 14, 2011 - v1
Checksum:iEC07765FB48DBD00
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAB05553.2.
PIRiT23537.
RefSeqiNP_001040973.1. NM_001047508.1.
UniGeneiCel.12615.

Genome annotation databases

EnsemblMetazoaiK09B11.9a; K09B11.9a; WBGene00010713.
GeneIDi178311.
KEGGicel:CELE_K09B11.9.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAB05553.2.
PIRiT23537.
RefSeqiNP_001040973.1. NM_001047508.1.
UniGeneiCel.12615.

3D structure databases

ProteinModelPortaliG5EGG0.
SMRiG5EGG0. Positions 87-696.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiG5EGG0. 114 interactions.
STRINGi6239.K09B11.9a.

Proteomic databases

EPDiG5EGG0.
PaxDbiG5EGG0.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiK09B11.9a; K09B11.9a; WBGene00010713.
GeneIDi178311.
KEGGicel:CELE_K09B11.9.

Organism-specific databases

CTDi178311.
WormBaseiK09B11.9a; CE38393; WBGene00010713; uso-1.

Phylogenomic databases

eggNOGiKOG0946. Eukaryota.
ENOG410XRCG. LUCA.
GeneTreeiENSGT00390000017018.
InParanoidiG5EGG0.
OMAiYGNEETE.
OrthoDBiEOG7K0ZBS.
PhylomeDBiG5EGG0.

Enzyme and pathway databases

ReactomeiR-CEL-6807878. COPI-mediated anterograde transport.

Miscellaneous databases

NextBioi900606.

Gene expression databases

ExpressionAtlasiG5EGG0. baseline and differential.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR006955. Uso1_p115_C.
IPR024095. Vesicle_P115-like.
IPR006953. Vesicle_Uso1_P115_head.
[Graphical view]
PANTHERiPTHR10013. PTHR10013. 1 hit.
PfamiPF04871. Uso1_p115_C. 1 hit.
PF04869. Uso1_p115_head. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    Caenorhabditis elegans Sequencing Consortium
    Sulson J.E., Waterston R.
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiG5EGG0_CAEEL
AccessioniPrimary (citable) accession number: G5EGG0
Entry historyi
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: April 13, 2016
This is version 44 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.