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Protein
Submitted name:

K09B11.9a

Gene

uso-1

Organism
Caenorhabditis elegans
Status
Unreviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
K09B11.9aImported
Gene namesi
Name:uso-1Imported
ORF Names:CELE_K09B11.9Imported, K09B11.9Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940 Componenti: Chromosome IV

Organism-specific databases

WormBaseiK09B11.9a; CE38393; WBGene00010713; uso-1.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

Expressioni

Gene expression databases

ExpressionAtlasiG5EGG0. baseline and differential.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
C09G1.4Q178654EBI-311986,EBI-317562
CELE_C16B8.3Q180433EBI-311986,EBI-315071
CELE_Y38H6C.14Q9XX473EBI-311986,EBI-330289
cnt-2Q9XX143EBI-311986,EBI-330314
eif-3.DP306422EBI-311986,EBI-311981
rsy-1Q9U2523EBI-311986,EBI-324871
unc-87P378063EBI-311986,EBI-319806
vab-3G5EDS13EBI-311986,EBI-319610

Protein-protein interaction databases

IntActiG5EGG0. 70 interactions.
STRINGi6239.K09B11.9a.

Structurei

3D structure databases

ProteinModelPortaliG5EGG0.
SMRiG5EGG0. Positions 87-696.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000017018.
InParanoidiG5EGG0.
OMAiAFSHEAQ.
OrthoDBiEOG7K0ZBS.
PhylomeDBiG5EGG0.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR024095. Vesicle_P115-like.
IPR006953. Vesicle_Uso1_P115_head.
[Graphical view]
PANTHERiPTHR10013. PTHR10013. 1 hit.
PfamiPF04869. Uso1_p115_head. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 2 hits.

Sequencei

Sequence statusi: Complete.

G5EGG0-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MFAYSTSSIT GSTLSVRSFS SDTTISNAFF NLPQSNFRQR LQAKKRSPKR
60 70 80 90 100
VSKRAPLRTH PPIPRQMSLF RNFFGGGQQD EDEDNGAEYV ETLVERAETC
110 120 130 140 150
TAPEDRRDAL RGLKGVAKKY RLAVGTMGMN AFIDVLETDR MNTEAMTIVL
160 170 180 190 200
DTMAIVLSTD DDSSESDELG ERLAEVMIKR KGFISSVLCA VEQFDIGVRR
210 220 230 240 250
TAIQLISNLL RHRGTEVQKA VMEHPQGIAK LVDVIHDNRE IIRNEAILMI
260 270 280 290 300
CELSRANSQV QQLLAYDNIF LDLLNIIETE PLDSIVIEDC MFVMLNLLRK
310 320 330 340 350
HAMNQQIFRE DQFVARLGKI LHTFLYGNEE TEDIEVTEWA KQRTANVIFL
360 370 380 390 400
LQIIRTLVSP DNTSENTHAA QKVLNQTKIL EELCRVLLSE IGASVEILTE
410 420 430 440 450
SIIVVAEAIR GNYTNQELFA NTVLDNGEDV PRTSLVVLLI SMTAEKQPYK
460 470 480 490 500
LRCAVFYCFL SYLFDNEFGK ARVIETLLPQ SHNSSSSLTT GALILQAISS
510 520 530 540 550
AESVQAWFGC VTLMHCLYDV DHLSEQLLRV NLTVVTEDPP LTLLNHVCQL
560 570 580 590 600
LVSTGNRRPQ TRAGLLMLLG TWLQNCPAAV SDFMAKDEHI QYLTTNLVDE
610 620 630 640 650
CGEGSESEQQ VLRGLMAFVL LSCLKNLQSK EARSSMEILI QRRVGKELIL
660 670 680 690 700
SALEGLSRTE QFVRAAQKQQ PTNELFLDFH FVKLFKSLEG TLAKQLKPNG
710 720 730 740 750
EFNGTSNDSI IQSYKELIKR QDGDIAQLKQ DNKRMSLEIE KLNAEVQNKQ
760 770 780 790 800
MEREVENLRV RLEESEAFKT QNEVLNSQLV ESQRLTQQWY AEAERYKQWA
810 820 830 840 850
QQWQAYQLAQ LPNGVETGLA QLQQQVNELE QQLGFGYQAF EQQSQTMLHY
860 870 880 890 900
TSENANLKDR LAKTEAALAE ANYKIEQLNL KPISNGIVVE HEPQADSEEF
910 920 930 940
SKLKQEQEEL LMLLADQHNK MSAYRRLLRN LKQPVTDDED E
Length:941
Mass (Da):106,853
Last modified:December 14, 2011 - v1
Checksum:iEC07765FB48DBD00
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAB05553.2.
PIRiT23537.
RefSeqiNP_001040973.1. NM_001047508.1.
UniGeneiCel.12615.

Genome annotation databases

EnsemblMetazoaiK09B11.9a; K09B11.9a; WBGene00010713.
GeneIDi178311.
KEGGicel:CELE_K09B11.9.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
BX284604 Genomic DNA. Translation: CAB05553.2.
PIRiT23537.
RefSeqiNP_001040973.1. NM_001047508.1.
UniGeneiCel.12615.

3D structure databases

ProteinModelPortaliG5EGG0.
SMRiG5EGG0. Positions 87-696.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiG5EGG0. 70 interactions.
STRINGi6239.K09B11.9a.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaiK09B11.9a; K09B11.9a; WBGene00010713.
GeneIDi178311.
KEGGicel:CELE_K09B11.9.

Organism-specific databases

CTDi178311.
WormBaseiK09B11.9a; CE38393; WBGene00010713; uso-1.

Phylogenomic databases

GeneTreeiENSGT00390000017018.
InParanoidiG5EGG0.
OMAiAFSHEAQ.
OrthoDBiEOG7K0ZBS.
PhylomeDBiG5EGG0.

Miscellaneous databases

NextBioi900606.
PROiG5EGG0.

Gene expression databases

ExpressionAtlasiG5EGG0. baseline and differential.

Family and domain databases

Gene3Di1.25.10.10. 1 hit.
InterProiIPR011989. ARM-like.
IPR016024. ARM-type_fold.
IPR024095. Vesicle_P115-like.
IPR006953. Vesicle_Uso1_P115_head.
[Graphical view]
PANTHERiPTHR10013. PTHR10013. 1 hit.
PfamiPF04869. Uso1_p115_head. 1 hit.
[Graphical view]
SUPFAMiSSF48371. SSF48371. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiG5EGG0_CAEEL
AccessioniPrimary (citable) accession number: G5EGG0
Entry historyi
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: June 24, 2015
This is version 36 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Proteomics identificationCombined sources, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.