G5EE09 (G5EE09_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
CCR4 EMBL AAK85706.1

Submitted name:
Protein CCR-4, isoform a EMBL CAB54511.2

Gene names

Name:	ccr-4 WormBase ZC518.3a WormBase WBGene00000376 EMBL CAB54511.2
ORF Names:	CELE_ZC518.3 EMBL CAB54511.2

Organism

Caenorhabditis elegans [Reference proteome] EMBL CAB54511.2

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	606 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Domain	Leucine-rich repeat SAAS SAAS025875 Repeat SAAS SAAS025875
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	G5EE09 [UniParc]. Last modified December 14, 2011. Version 1. Checksum: 7B18354315FC17DF	FASTA	606	68,604
	10 20 30 40 50 60 MVRVLKSDVM SSGDMTSEYK DKQGGGAGQP LTKSENNDGK KTLTNGMSRV HRVLTEDEIA 70 80 90 100 110 120 SGRSTRWTEL EIHGRVKNLS PSLWQLTHLS ALFLNNNGLT RLPPEIAQLT NLTMLDISNN 130 140 150 160 170 180 KLRSLPTELG DMISLCHLYL NNNQLRVLPY ELGKLFRIQT LGLQGNPLSP EISKIYHETN 190 200 210 220 230 240 GAQKILQFLL DHLTINTHPP PERNWVMIRH ADPERPIATF TVLCYNVLCD KYATVNQYSY 250 260 270 280 290 300 CPSWALNWEY RKGLIIKEIR TYEADVITLQ EVETEQFRTL FQPELKQLGY AGIFEAKSRA 310 320 330 340 350 360 KTMGEEERKY VDGCAIFWKV DKFDMDKQYL FEFSSVAMKK ASTSENMLNR VMPRDNIGLC 370 380 390 400 410 420 AVLKIKESVY ANKFLGRMQI PMNDNVVGNP LVVATAHIHW DPEFCDVKLV QSMMLTHEVS 430 440 450 460 470 480 RVLEEVSKKY QITQQQVPVL ICGDFNSLPD SGVFEYLSKG QITRRHMDLK SFRDDSCLEK 490 500 510 520 530 540 FTNSTDKNVI SHPLRLDSAC DINSIPFTNY TLDFKGMIDY IFATPQSLAR LGILGPFDPQ 550 560 570 580 590 600 WVQSNKILGF PHPHVASDHI PIMAQYAIIP TTHQRQQPLQ QAGPAAGVIG GGFPSTPSGA QPFLRC

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	WormBase Consortium Thomas K. Submitted (JAN-1996) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Bristol N2 EMBL CAB54511.2.
[2]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." Caenorhabditis elegans Sequencing Consortium Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2 EMBL CAB54511.2.
[3]	"Identification of four families of yCCR4- and Mg2+-dependent endonuclease-related proteins in higher eukaryotes, and characterization of orthologs of yCCR4 with a conserved leucine-rich repeat essential for hCAF1/hPOP2 binding." Dupressoir A., Morel A.-P., Barbot W., Loireau M.-P., Corbo L., Heidmann T. BMC Genomics 2:9-9(2001) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AY043268 mRNA. Translation: AAK85706.1. Z68753 Genomic DNA. Translation: CAB54511.2.
PIR	T27632.
RefSeq	NP_502355.2. NM_069954.5.
UniGene	Cel.6023.
3D structure databases
SMR	G5EE09. Positions 28-570.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	ZC518.3a; ZC518.3a; ZC518.3.
GeneID	178184.
KEGG	cel:CELE_ZC518.3.
Organism-specific databases
CTD	178184.
WormBase	ZC518.3a; CE31743; WBGene00000376; ccr-4.
Phylogenomic databases
GeneTree	ENSGT00550000074364.
KO	K12603.
Family and domain databases
InterPro	IPR005135. Endo/exonuclease/phosphatase. IPR001611. Leu-rich_rpt. IPR025875. Leu-rich_rpt_4. [Graphical view]
Pfam	PF03372. Exo_endo_phos. 1 hit. PF00560. LRR_1. 1 hit. PF12799. LRR_4. 1 hit. [Graphical view]
SUPFAM	SSF56219. Exo_endo_phos. 1 hit.
PROSITE	PS51450. LRR. 4 hits. [Graphical view]
ProtoNet	Search...
Other
NextBio	900070.

Entry information

Entry name

G5EE09_CAEEL

Accession

Primary (citable) accession number: G5EE09

Entry history

Integrated into UniProtKB/TrEMBL:	December 14, 2011
Last sequence update:	December 14, 2011
Last modified:	May 1, 2013
This is version 17 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)