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G5EDF5 (G5EDF5_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 27. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Protein TUFM-2 EMBL CCD65152.1
Gene names
Name:tufm-2 EMBL CCD65152.1 WormBase C43E11.4
ORF Names:C43E11.4 WormBase C43E11.4, CELE_C43E11.4 EMBL CCD65152.1
OrganismCaenorhabditis elegans [Reference proteome] EMBL CCD65152.1
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length439 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

Sequences

Sequence LengthMass (Da)Tools
G5EDF5 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: 5EE533C1A3636D5A

FASTA43947,831
        10         20         30         40         50         60 
MNPAALSAFT RSLLFNRCST SSFCNSITRN AVAFFATAAA TPKINVNVGT IGHIDHGKTT 

        70         80         90        100        110        120 
LTSAITRVQA KKGFAKHIKF DEIDKGKEEK KRGITINVAH IGYESPLRRY SHTDCPGHSD 

       130        140        150        160        170        180 
FIKNMICGTS QMDVAVLVIA ATDGVMEQTK EHLILAKQVG VKNMAIFINK ADLVEEDDLD 

       190        200        210        220        230        240 
LVEMEARELL SLHGFNGDAT PVIRGSALSA LEGQDISCIE RLIDALDSLP EPDRNEKDTF 

       250        260        270        280        290        300 
VMPIASKTAI TGRGTVIVGT LERGVLKKGD KVEIKGDGQT LQTTASDIQV FGKSVKEVRA 

       310        320        330        340        350        360 
GDHCGVLCRG VKGDTVKRGM WAGHPGAVTI TNRVKVELYL LSEAENGRKI GIRTGFTDKM 

       370        380        390        400        410        420 
YCSTWDQVGR FDMSNELLMP GEHTSATVLL MKDMPLRKGM PFTLREGSSK TTIARGIISD 

       430 
LEDHVAVEKH NLKKSAEKM 

« Hide

References

« Hide 'large scale' references
[1]WormBase Consortium
Gattung S., Scheet P.
Submitted (MAY-1996) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Bristol N2 EMBL CCD65152.1.
[2]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
[3]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
Caenorhabditis elegans Sequencing Consortium
Science 282:2012-2018(1998)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Bristol N2 EMBL CCD65152.1.
[4]"A unique serine-specific elongation factor Tu found in nematode mitochondria."
Ohtsuki T., Sato A., Watanabe Y., Watanabe K.
Nat. Struct. Biol. 9:669-673(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
[5]"Identification of the residues involved in the unique serine specificity of Caenorhabditis elegans mitochondrial EF-Tu2."
Sato A., Watanabe Y., Suzuki T., Komiyama M., Watanabe K., Ohtsuki T.
Biochemistry 45:10920-10927(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AB010028 mRNA. Translation: BAA31345.1.
FO080612 Genomic DNA. Translation: CCD65152.1.
PIRT37273.
RefSeqNP_491338.2. NM_058937.4.
UniGeneCel.19656.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaC43E11.4; C43E11.4; WBGene00007001.
GeneID172024.
KEGGcel:CELE_C43E11.4.

Organism-specific databases

CTD172024.
WormBaseC43E11.4; CE32610; WBGene00007001; tufm-2.

Phylogenomic databases

GeneTreeENSGT00550000074682.
KOK02358.
OMAISGASQM.
OrthoDBEOG73BVCN.

Family and domain databases

Gene3D3.40.50.300. 1 hit.
InterProIPR000795. EF_GTP-bd_dom.
IPR027417. P-loop_NTPase.
IPR005225. Small_GTP-bd_dom.
IPR009000. Transl_B-barrel.
IPR009001. Transl_elong_EF1A/Init_IF2_C.
IPR004161. Transl_elong_EFTu/EF1A_2.
IPR004160. Transl_elong_EFTu/EF1A_C.
[Graphical view]
PfamPF00009. GTP_EFTU. 1 hit.
PF03144. GTP_EFTU_D2. 1 hit.
PF03143. GTP_EFTU_D3. 1 hit.
[Graphical view]
PRINTSPR00315. ELONGATNFCT.
SUPFAMSSF50447. SSF50447. 1 hit.
SSF50465. SSF50465. 1 hit.
SSF52540. SSF52540. 1 hit.
TIGRFAMsTIGR00231. small_GTP. 1 hit.
PROSITEPS00301. EFACTOR_GTP. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

NextBio873713.

Entry information

Entry nameG5EDF5_CAEEL
AccessionPrimary (citable) accession number: G5EDF5
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: July 9, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)