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G5EDF5

- G5EDF5_CAEEL

UniProt

G5EDF5 - G5EDF5_CAEEL

Protein
Submitted name:

Mitochondrial elongation factor Tu homologue

Gene

tufm-2

Organism
Caenorhabditis elegans
Status
Unreviewed - Annotation score: 1 out of 5- Experimental evidence at transcript leveli
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    • History
      Entry version 29 (01 Oct 2014)
      Sequence version 1 (14 Dec 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. GTPase activity Source: InterPro
    2. GTP binding Source: UniProtKB-KW
    3. translation elongation factor activity Source: UniProtKB-KW

    Keywords - Molecular functioni

    Elongation factorImported

    Keywords - Biological processi

    Protein biosynthesis

    Keywords - Ligandi

    GTP-bindingUniRule annotation, Nucleotide-binding

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Mitochondrial elongation factor Tu homologueImported
    Submitted name:
    Protein TUFM-2Imported
    Gene namesi
    Name:tufm-2Imported
    ORF Names:C43E11.4Imported, CELE_C43E11.4Imported
    OrganismiCaenorhabditis elegansImported
    Taxonomic identifieri6239 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
    ProteomesiUP000001940: Chromosome I

    Organism-specific databases

    WormBaseiC43E11.4; CE32610; WBGene00007001; tufm-2.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00550000074682.
    KOiK02358.
    OMAiISGASQM.
    OrthoDBiEOG73BVCN.

    Family and domain databases

    Gene3Di3.40.50.300. 1 hit.
    InterProiIPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view]
    PfamiPF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view]
    PRINTSiPR00315. ELONGATNFCT.
    SUPFAMiSSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsiTIGR00231. small_GTP. 1 hit.
    PROSITEiPS00301. EFACTOR_GTP. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G5EDF5-1 [UniParc]FASTAAdd to Basket

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    MNPAALSAFT RSLLFNRCST SSFCNSITRN AVAFFATAAA TPKINVNVGT    50
    IGHIDHGKTT LTSAITRVQA KKGFAKHIKF DEIDKGKEEK KRGITINVAH 100
    IGYESPLRRY SHTDCPGHSD FIKNMICGTS QMDVAVLVIA ATDGVMEQTK 150
    EHLILAKQVG VKNMAIFINK ADLVEEDDLD LVEMEARELL SLHGFNGDAT 200
    PVIRGSALSA LEGQDISCIE RLIDALDSLP EPDRNEKDTF VMPIASKTAI 250
    TGRGTVIVGT LERGVLKKGD KVEIKGDGQT LQTTASDIQV FGKSVKEVRA 300
    GDHCGVLCRG VKGDTVKRGM WAGHPGAVTI TNRVKVELYL LSEAENGRKI 350
    GIRTGFTDKM YCSTWDQVGR FDMSNELLMP GEHTSATVLL MKDMPLRKGM 400
    PFTLREGSSK TTIARGIISD LEDHVAVEKH NLKKSAEKM 439
    Length:439
    Mass (Da):47,831
    Last modified:December 14, 2011 - v1
    Checksum:i5EE533C1A3636D5A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB010028 mRNA. Translation: BAA31345.1.
    FO080612 Genomic DNA. Translation: CCD65152.1.
    PIRiT37273.
    RefSeqiNP_491338.2. NM_058937.4.
    UniGeneiCel.19656.

    Genome annotation databases

    EnsemblMetazoaiC43E11.4; C43E11.4; WBGene00007001.
    GeneIDi172024.
    KEGGicel:CELE_C43E11.4.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AB010028 mRNA. Translation: BAA31345.1 .
    FO080612 Genomic DNA. Translation: CCD65152.1 .
    PIRi T37273.
    RefSeqi NP_491338.2. NM_058937.4.
    UniGenei Cel.19656.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai C43E11.4 ; C43E11.4 ; WBGene00007001 .
    GeneIDi 172024.
    KEGGi cel:CELE_C43E11.4.

    Organism-specific databases

    CTDi 172024.
    WormBasei C43E11.4 ; CE32610 ; WBGene00007001 ; tufm-2.

    Phylogenomic databases

    GeneTreei ENSGT00550000074682.
    KOi K02358.
    OMAi ISGASQM.
    OrthoDBi EOG73BVCN.

    Miscellaneous databases

    NextBioi 873713.

    Family and domain databases

    Gene3Di 3.40.50.300. 1 hit.
    InterProi IPR000795. EF_GTP-bd_dom.
    IPR027417. P-loop_NTPase.
    IPR005225. Small_GTP-bd_dom.
    IPR009000. Transl_B-barrel.
    IPR009001. Transl_elong_EF1A/Init_IF2_C.
    IPR004161. Transl_elong_EFTu/EF1A_2.
    IPR004160. Transl_elong_EFTu/EF1A_C.
    [Graphical view ]
    Pfami PF00009. GTP_EFTU. 1 hit.
    PF03144. GTP_EFTU_D2. 1 hit.
    PF03143. GTP_EFTU_D3. 1 hit.
    [Graphical view ]
    PRINTSi PR00315. ELONGATNFCT.
    SUPFAMi SSF50447. SSF50447. 1 hit.
    SSF50465. SSF50465. 1 hit.
    SSF52540. SSF52540. 1 hit.
    TIGRFAMsi TIGR00231. small_GTP. 1 hit.
    PROSITEi PS00301. EFACTOR_GTP. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. WormBase Consortium
      Gattung S., Scheet P.
      Submitted (MAY-1996) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Bristol N2Imported.
    2. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
      Caenorhabditis elegans Sequencing Consortium
      Science 282:2012-2018(1998)
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: Bristol N2Imported.
    3. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
      The C. elegans sequencing consortium
      Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Bristol N2Imported.
    4. "A unique serine-specific elongation factor Tu found in nematode mitochondria."
      Ohtsuki T., Sato A., Watanabe Y., Watanabe K.
      Nat. Struct. Biol. 9:669-673(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
    5. "Identification of the residues involved in the unique serine specificity of Caenorhabditis elegans mitochondrial EF-Tu2."
      Sato A., Watanabe Y., Suzuki T., Komiyama M., Watanabe K., Ohtsuki T.
      Biochemistry 45:10920-10927(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.

    Entry informationi

    Entry nameiG5EDF5_CAEEL
    AccessioniPrimary (citable) accession number: G5EDF5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 14, 2011
    Last sequence update: December 14, 2011
    Last modified: October 1, 2014
    This is version 29 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3