G5EDF5 (G5EDF5_CAEEL) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Mitochondrial elongation factor Tu homologue EMBL BAA31345.1

Submitted name:
Protein TUFM-2 EMBL CCD65152.1

Gene names

Name:	tufm-2 EMBL CCD65152.1 WormBase C43E11.4 WormBase WBGene00007001
ORF Names:	C43E11.4 WormBase WBGene00007001, CELE_C43E11.4 EMBL CCD65152.1

Organism

Caenorhabditis elegans [Reference proteome] EMBL CCD65152.1

Taxonomic identifier

6239 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Protostomia › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length	439 AA.
Sequence status	Complete.
Protein existence	Evidence at transcript level

Ontologies

Keywords
Biological process	Protein biosynthesis
Ligand	GTP-binding RuleBase RU000323 Nucleotide-binding
Molecular function	Elongation factor EMBL BAA31345.1
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	GTP catabolic process Inferred from electronic annotation. Source: GOC
Cellular_component	intracellular Inferred from electronic annotation. Source: InterPro
Molecular_function	GTP binding Inferred from electronic annotation. Source: UniProtKB-KW GTPase activity Inferred from electronic annotation. Source: InterPro translation elongation factor activity Inferred from electronic annotation. Source: UniProtKB-KW
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G5EDF5 [UniParc]. Last modified December 14, 2011. Version 1. Checksum: 5EE533C1A3636D5A	FASTA	439	47,831
	10 20 30 40 50 60 MNPAALSAFT RSLLFNRCST SSFCNSITRN AVAFFATAAA TPKINVNVGT IGHIDHGKTT 70 80 90 100 110 120 LTSAITRVQA KKGFAKHIKF DEIDKGKEEK KRGITINVAH IGYESPLRRY SHTDCPGHSD 130 140 150 160 170 180 FIKNMICGTS QMDVAVLVIA ATDGVMEQTK EHLILAKQVG VKNMAIFINK ADLVEEDDLD 190 200 210 220 230 240 LVEMEARELL SLHGFNGDAT PVIRGSALSA LEGQDISCIE RLIDALDSLP EPDRNEKDTF 250 260 270 280 290 300 VMPIASKTAI TGRGTVIVGT LERGVLKKGD KVEIKGDGQT LQTTASDIQV FGKSVKEVRA 310 320 330 340 350 360 GDHCGVLCRG VKGDTVKRGM WAGHPGAVTI TNRVKVELYL LSEAENGRKI GIRTGFTDKM 370 380 390 400 410 420 YCSTWDQVGR FDMSNELLMP GEHTSATVLL MKDMPLRKGM PFTLREGSSK TTIARGIISD 430 LEDHVAVEKH NLKKSAEKM

References

	« Hide 'large scale' referencesShow 'large scale' references »
[1]	WormBase Consortium Gattung S., Scheet P. Submitted (MAY-1996) to the EMBL/GenBank/DDBJ databases Cited for: NUCLEOTIDE SEQUENCE. Strain: Bristol N2 EMBL CCD65152.1.
[2]	"Genome sequence of the nematode C. elegans: a platform for investigating biology." Caenorhabditis elegans Sequencing Consortium Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Bristol N2 EMBL CCD65152.1.
[3]	"A unique serine-specific elongation factor Tu found in nematode mitochondria." Ohtsuki T., Sato A., Watanabe Y., Watanabe K. Nat. Struct. Biol. 9:669-673(2002) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
[4]	"Identification of the residues involved in the unique serine specificity of Caenorhabditis elegans mitochondrial EF-Tu2." Sato A., Watanabe Y., Suzuki T., Komiyama M., Watanabe K., Ohtsuki T. Biochemistry 45:10920-10927(2006) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	AB010028 mRNA. Translation: BAA31345.1. FO080612 Genomic DNA. Translation: CCD65152.1.
PIR	T37273.
RefSeq	NP_491338.2. NM_058937.4.
UniGene	Cel.19656.
3D structure databases
HSSP	HSSP built from PDB template 1EFU based on UniProtKB P02990.
SMR	G5EDF5. Positions 43-420.
ModBase	Search...
Protein-protein interaction databases
IntAct	G5EDF5. 1 interaction.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblMetazoa	C43E11.4; C43E11.4; C43E11.4.
GeneID	172024.
KEGG	cel:CELE_C43E11.4.
Organism-specific databases
CTD	172024.
WormBase	C43E11.4; CE32610; WBGene00007001; tufm-2.
Phylogenomic databases
GeneTree	ENSGT00550000074682.
KO	K02358.
OMA	ISGASQM.
Family and domain databases
InterPro	IPR000795. EF_GTP-bd_dom. IPR005225. Small_GTP-bd_dom. IPR009001. Transl_elong_EF1A/Init_IF2_C. IPR004161. Transl_elong_EFTu/EF1A_2. IPR004541. Transl_elong_EFTu/EF1A_bac/org. IPR004160. Transl_elong_EFTu/EF1A_C. IPR009000. Transl_elong_init/rib_B-barrel. [Graphical view]
PANTHER	PTHR23115:SF31. PTHR23115:SF31. 1 hit.
Pfam	PF00009. GTP_EFTU. 1 hit. PF03144. GTP_EFTU_D2. 1 hit. PF03143. GTP_EFTU_D3. 1 hit. [Graphical view]
PRINTS	PR00315. ELONGATNFCT.
SUPFAM	SSF50465. Elong_init_C. 1 hit. SSF50447. Translat_factor. 1 hit.
TIGRFAMs	TIGR00231. small_GTP. 1 hit.
PROSITE	PS00301. EFACTOR_GTP. 1 hit. [Graphical view]
ProtoNet	Search...
Other
NextBio	873713.

Entry information

Entry name

G5EDF5_CAEEL

Accession

Primary (citable) accession number: G5EDF5

Entry history

Integrated into UniProtKB/TrEMBL:	December 14, 2011
Last sequence update:	December 14, 2011
Last modified:	May 1, 2013
This is version 16 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)