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G5EDB7 (G5EDB7_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names

Protein UNC-25, isoform a EMBL CAA21537.1
Gene names
Name:unc-25 WormBase Y37D8A.23a EMBL CAA21537.1
ORF Names:CELE_Y37D8A.23 EMBL CAA21537.1, Y37D8A.23 WormBase Y37D8A.23a
OrganismCaenorhabditis elegans [Reference proteome] EMBL AAD19958.1
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis

Protein attributes

Sequence length508 AA.
Sequence statusComplete.
Protein existenceEvidence at transcript level

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Sequences

Sequence LengthMass (Da)Tools
G5EDB7 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: 592DE1381ADF02AB

FASTA50857,793
        10         20         30         40         50         60 
MSSAAADESD AVLENLIAKE ILPQTGNWEG TEEFLNRIVQ VLLKYIKDQN DRDQKILEFH 

        70         80         90        100        110        120 
HPDKMQMLMD LSIPEKPESL LKLVKSCEDV LRLGVRTGHP RFFNQISCGL DLVSMAGEWL 

       130        140        150        160        170        180 
TATANTNMFT YEIAPVFILM EKSVMARMWE AVGWDPEKAD GIFAPGGAIA NLYAMNAARH 

       190        200        210        220        230        240 
QLWPRSKHLG MKDIPTLCCF TSEDSHYSIK SASAVLGIGA DYCFNIPTDK NGKMIPEALE 

       250        260        270        280        290        300 
AKIIECKKEG LTPFFACCTA GSTVYGAFDP LERVANICER HKLWFHVDAA WGGGMLLSPE 

       310        320        330        340        350        360 
HRYKLAGIER ANSVTWNPHK LMGALLQCSA CLFRQDGLLF QCNQMSADYL FQQDKPYDVS 

       370        380        390        400        410        420 
FDTGDKAIQC GRHNDVFKLW LMWKSKGMEG YRQQINKLMD LANYFTRRIK ETEGFELIIE 

       430        440        450        460        470        480 
NPEFLNICFW YVPSKIRNLE PAEMRARLEK IAPKIKAGMM QRGTTMVGYQ PDKQRPNFFR 

       490        500 
MIISNQAITR EDLDFLIKEI VDIGESLE 

« Hide

References

« Hide 'large scale' references
[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
The C. elegans sequencing consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2.
[2]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
Caenorhabditis elegans Sequencing Consortium
Science 282:2012-2018(1998)
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Bristol N2 EMBL CAA21537.1.
[3]WormBase Consortium
Barlow K.
Submitted (OCT-1998) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Bristol N2 EMBL CAA21537.1.
[4]"The Caenorhabditis elegans gene unc-25 encodes glutamic acid decarboxylase and is required for synaptic transmission but not synaptic development."
Jin Y., Jorgensen E., Hartwieg E., Horvitz H.R.
J. Neurosci. 19:539-548(1999) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Bristol EMBL AAD19958.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AF109378 mRNA. Translation: AAD19958.1.
AL032626 Genomic DNA. Translation: CAA21537.1.
PIRT26636.
RefSeqNP_499689.1. NM_067288.4.
UniGeneCel.7826.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaY37D8A.23a; Y37D8A.23a; Y37D8A.23.
GeneID176713.
KEGGcel:CELE_Y37D8A.23.

Organism-specific databases

CTD176713.
WormBaseY37D8A.23a; CE20226; WBGene00006762; unc-25.

Phylogenomic databases

KOK01580.
OMAISMAGEW.
OrthoDBEOG7H1JM3.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
ProtoNetSearch...

Other

NextBio893696.

Entry information

Entry nameG5EDB7_CAEEL
AccessionPrimary (citable) accession number: G5EDB7
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: April 16, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)