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G5ECU1 (G5ECU1_CAEEL) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Protein SKR-1 EMBL CAB03110.1
Gene names
Name:skr-1 EMBL CAB03110.1 WormBase F46A9.5
ORF Names:CELE_F46A9.5 EMBL CAB03110.1
OrganismCaenorhabditis elegans [Reference proteome] EMBL CAB03110.1
Taxonomic identifier6239 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Ecdysozoa › Nematoda › Chromadorea › Rhabditida › Rhabditoidea › Rhabditidae › Peloderinae › Caenorhabditis

Protein attributes

Sequence length176 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Ontologies

Keywords
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processubiquitin-dependent protein catabolic process

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G5ECU1 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: 3FCDC4D52BC2DF35

FASTA17620,032
        10         20         30         40         50         60 
MADQKKVSEA AKEREIKISS SDNEIFLVPR NVIRLSNTIN TLLMDLGLDD EEGTNAEPIP 

        70         80         90        100        110        120 
VQNVTASILK KVISWCNHHH SDPISTEDSD NREKRTDDIG SWDVEFLKVD QGTLFELILA 

       130        140        150        160        170 
ANYLDIKGLL DVTCKTVANM IKGKSPEEIR RTFNIKNDFT PEEEEQIRKE NAWCED

« Hide

References

[1]"Genome sequence of the nematode C. elegans: a platform for investigating biology."
Caenorhabditis elegans Sequencing Consortium
Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Bristol N2 EMBL CAB03110.1.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		Z81084, Z81072 Genomic DNA. Translation: CAB03110.1.
PIRT21573.
RefSeqNP_492513.1. NM_060112.5.

3D structure databases

HSSPHSSP built from PDB template 1FS1 based on UniProtKB P34991.
ProteinModelPortalG5ECU1.
SMRG5ECU1. Positions 16-174.
ModBaseSearch...

Protein-protein interaction databases

IntActG5ECU1. 19 interactions.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaF46A9.5.1; F46A9.5.1; F46A9.5.
F46A9.5.2; F46A9.5.2; F46A9.5.
F46A9.5.3; F46A9.5.3; F46A9.5.
GeneID172775.
KEGGcel:CELE_F46A9.5.

Organism-specific databases

CTD172775.
WormBaseF46A9.5; CE10580; WBGene00004807; skr-1.

Phylogenomic databases

GeneTreeENSGT00390000012652.
KOK03094.
OMAVIQWCTY.

Gene expression databases

ArrayExpressG5ECU1.

Family and domain databases

Gene3D3.30.710.10. 1 hit.
InterProIPR011333. BTB/POZ_fold.
IPR016897. E3_ubiquit_lig_SCF_Skp.
IPR001232. Skp1_comp.
IPR016072. Skp1_comp_dimer.
IPR016073. Skp1_comp_POZ.
[Graphical view]
PANTHERPTHR11165. PTHR11165. 1 hit.
PfamPF01466. Skp1. 1 hit.
PF03931. Skp1_POZ. 1 hit.
[Graphical view]
PIRSFPIRSF028729. E3_ubiquit_lig_SCF_Skp. 1 hit.
SMARTSM00512. Skp1. 1 hit.
[Graphical view]
SUPFAMSSF54695. BTB/POZ_fold. 1 hit.
SSF81382. Skp1_comp_dimer. 1 hit.
ProtoNetSearch...

Other

NextBio876957.

Entry information

Entry nameG5ECU1_CAEEL
AccessionPrimary (citable) accession number: G5ECU1
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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