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G5ECU1

- G5ECU1_CAEEL

UniProt

G5ECU1 - G5ECU1_CAEEL

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Protein
Submitted name: Protein SKR-1
Gene
skr-1, CELE_F46A9.5, F46A9.5
Organism
Caenorhabditis elegans
Status
Unreviewed - Annotation score: 3 out of 5 - Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

  1. protein binding Source: IntAct
Complete GO annotation...

GO - Biological processi

  1. positive regulation of apoptotic process Source: WormBase
  2. ubiquitin-dependent protein catabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_205379. SCF-beta-TrCP mediated degradation of Emi1.
REACT_219545. Cyclin D associated events in G1.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein SKR-1Imported
Gene namesi
Name:skr-1Imported
ORF Names:CELE_F46A9.5Imported, F46A9.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome I

Organism-specific databases

WormBaseiF46A9.5; CE10580; WBGene00004807; skr-1.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
CELE_C14B1.3Q179623EBI-323117,EBI-2003707
CELE_F46F11.6P913053EBI-323117,EBI-2003766
dre-1Q942513EBI-323117,EBI-314286
fbxa-101G5EDX94EBI-323117,EBI-2003730
fbxa-164O171984EBI-323117,EBI-2412975
fbxa-196O165255EBI-323117,EBI-329491
fog-2Q2YS434EBI-323117,EBI-2417735
fsn-1Q182233EBI-323117,EBI-2003744
sel-10Q937945EBI-323117,EBI-323098

Protein-protein interaction databases

IntActiG5ECU1. 19 interactions.

Structurei

3D structure databases

ProteinModelPortaliG5ECU1.
SMRiG5ECU1. Positions 16-174.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000012652.
KOiK03094.
OMAiVIQWCTY.
PhylomeDBiG5ECU1.

Family and domain databases

Gene3Di3.30.710.10. 1 hit.
InterProiIPR011333. BTB/POZ_fold.
IPR016897. E3_ubiquit_lig_SCF_Skp.
IPR001232. Skp1_comp.
IPR016072. Skp1_comp_dimer.
IPR016073. Skp1_comp_POZ.
[Graphical view]
PANTHERiPTHR11165. PTHR11165. 1 hit.
PfamiPF01466. Skp1. 1 hit.
PF03931. Skp1_POZ. 1 hit.
[Graphical view]
PIRSFiPIRSF028729. E3_ubiquit_lig_SCF_Skp. 1 hit.
SMARTiSM00512. Skp1. 1 hit.
[Graphical view]
SUPFAMiSSF54695. SSF54695. 1 hit.
SSF81382. SSF81382. 1 hit.

Sequencei

Sequence statusi: Complete.

G5ECU1-1 [UniParc]FASTAAdd to Basket

« Hide

MADQKKVSEA AKEREIKISS SDNEIFLVPR NVIRLSNTIN TLLMDLGLDD    50
EEGTNAEPIP VQNVTASILK KVISWCNHHH SDPISTEDSD NREKRTDDIG 100
SWDVEFLKVD QGTLFELILA ANYLDIKGLL DVTCKTVANM IKGKSPEEIR 150
RTFNIKNDFT PEEEEQIRKE NAWCED 176
Length:176
Mass (Da):20,032
Last modified:December 14, 2011 - v1
Checksum:i3FCDC4D52BC2DF35
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z81084, Z81072 Genomic DNA. Translation: CAB03110.1.
PIRiT21573.
RefSeqiNP_492513.1. NM_060112.5.
UniGeneiCel.18311.

Genome annotation databases

EnsemblMetazoaiF46A9.5.1; F46A9.5.1; WBGene00004807.
F46A9.5.2; F46A9.5.2; WBGene00004807.
F46A9.5.3; F46A9.5.3; WBGene00004807.
GeneIDi172775.
KEGGicel:CELE_F46A9.5.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z81084 , Z81072 Genomic DNA. Translation: CAB03110.1 .
PIRi T21573.
RefSeqi NP_492513.1. NM_060112.5.
UniGenei Cel.18311.

3D structure databases

ProteinModelPortali G5ECU1.
SMRi G5ECU1. Positions 16-174.
ModBasei Search...

Protein-protein interaction databases

IntActi G5ECU1. 19 interactions.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai F46A9.5.1 ; F46A9.5.1 ; WBGene00004807 .
F46A9.5.2 ; F46A9.5.2 ; WBGene00004807 .
F46A9.5.3 ; F46A9.5.3 ; WBGene00004807 .
GeneIDi 172775.
KEGGi cel:CELE_F46A9.5.

Organism-specific databases

CTDi 172775.
WormBasei F46A9.5 ; CE10580 ; WBGene00004807 ; skr-1.

Phylogenomic databases

GeneTreei ENSGT00390000012652.
KOi K03094.
OMAi VIQWCTY.
PhylomeDBi G5ECU1.

Enzyme and pathway databases

Reactomei REACT_205379. SCF-beta-TrCP mediated degradation of Emi1.
REACT_219545. Cyclin D associated events in G1.

Miscellaneous databases

NextBioi 876957.
PROi G5ECU1.

Family and domain databases

Gene3Di 3.30.710.10. 1 hit.
InterProi IPR011333. BTB/POZ_fold.
IPR016897. E3_ubiquit_lig_SCF_Skp.
IPR001232. Skp1_comp.
IPR016072. Skp1_comp_dimer.
IPR016073. Skp1_comp_POZ.
[Graphical view ]
PANTHERi PTHR11165. PTHR11165. 1 hit.
Pfami PF01466. Skp1. 1 hit.
PF03931. Skp1_POZ. 1 hit.
[Graphical view ]
PIRSFi PIRSF028729. E3_ubiquit_lig_SCF_Skp. 1 hit.
SMARTi SM00512. Skp1. 1 hit.
[Graphical view ]
SUPFAMi SSF54695. SSF54695. 1 hit.
SSF81382. SSF81382. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2.

Entry informationi

Entry nameiG5ECU1_CAEEL
AccessioniPrimary (citable) accession number: G5ECU1
Entry historyi
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: September 3, 2014
This is version 27 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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