Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.

G5ECU1

- G5ECU1_CAEEL

UniProt

G5ECU1 - G5ECU1_CAEEL

(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

Protein
Submitted name:

Protein SKR-1

Gene

skr-1

Organism
Caenorhabditis elegans
Status
Unreviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli

Functioni

GO - Biological processi

  1. positive regulation of apoptotic process Source: WormBase
  2. ubiquitin-dependent protein catabolic process Source: InterPro
Complete GO annotation...

Enzyme and pathway databases

ReactomeiREACT_205379. SCF-beta-TrCP mediated degradation of Emi1.
REACT_219545. Cyclin D associated events in G1.

Names & Taxonomyi

Protein namesi
Submitted name:
Protein SKR-1Imported
Gene namesi
Name:skr-1Imported
ORF Names:CELE_F46A9.5Imported, F46A9.5Imported
OrganismiCaenorhabditis elegansImported
Taxonomic identifieri6239 [NCBI]
Taxonomic lineageiEukaryotaMetazoaEcdysozoaNematodaChromadoreaRhabditidaRhabditoideaRhabditidaePeloderinaeCaenorhabditis
ProteomesiUP000001940: Chromosome I

Organism-specific databases

WormBaseiF46A9.5; CE10580; WBGene00004807; skr-1.

Expressioni

Gene expression databases

ExpressionAtlasiG5ECU1. baseline.

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
CELE_C14B1.3Q179623EBI-323117,EBI-2003707
CELE_F46F11.6P913053EBI-323117,EBI-2003766
dre-1Q942513EBI-323117,EBI-314286
fbxa-101G5EDX94EBI-323117,EBI-2003730
fbxa-164O171984EBI-323117,EBI-2412975
fbxa-196O165255EBI-323117,EBI-329491
fog-2Q2YS434EBI-323117,EBI-2417735
fsn-1Q182233EBI-323117,EBI-2003744
sel-10Q937945EBI-323117,EBI-323098

Protein-protein interaction databases

IntActiG5ECU1. 19 interactions.

Structurei

3D structure databases

ProteinModelPortaliG5ECU1.
SMRiG5ECU1. Positions 16-174.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000012652.
InParanoidiG5ECU1.
KOiK03094.
OMAiVIQWCTY.
PhylomeDBiG5ECU1.

Family and domain databases

Gene3Di3.30.710.10. 1 hit.
InterProiIPR011333. BTB/POZ_fold.
IPR016897. E3_ubiquit_lig_SCF_Skp.
IPR001232. Skp1_comp.
IPR016072. Skp1_comp_dimer.
IPR016073. Skp1_comp_POZ.
[Graphical view]
PANTHERiPTHR11165. PTHR11165. 1 hit.
PfamiPF01466. Skp1. 1 hit.
PF03931. Skp1_POZ. 1 hit.
[Graphical view]
PIRSFiPIRSF028729. E3_ubiquit_lig_SCF_Skp. 1 hit.
SMARTiSM00512. Skp1. 1 hit.
[Graphical view]
SUPFAMiSSF54695. SSF54695. 1 hit.
SSF81382. SSF81382. 1 hit.

Sequencei

Sequence statusi: Complete.

G5ECU1-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MADQKKVSEA AKEREIKISS SDNEIFLVPR NVIRLSNTIN TLLMDLGLDD
60 70 80 90 100
EEGTNAEPIP VQNVTASILK KVISWCNHHH SDPISTEDSD NREKRTDDIG
110 120 130 140 150
SWDVEFLKVD QGTLFELILA ANYLDIKGLL DVTCKTVANM IKGKSPEEIR
160 170
RTFNIKNDFT PEEEEQIRKE NAWCED
Length:176
Mass (Da):20,032
Last modified:December 14, 2011 - v1
Checksum:i3FCDC4D52BC2DF35
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z81084, Z81072 Genomic DNA. Translation: CAB03110.1.
PIRiT21573.
RefSeqiNP_492513.1. NM_060112.5.
UniGeneiCel.18311.

Genome annotation databases

EnsemblMetazoaiF46A9.5.1; F46A9.5.1; WBGene00004807.
F46A9.5.2; F46A9.5.2; WBGene00004807.
F46A9.5.3; F46A9.5.3; WBGene00004807.
GeneIDi172775.
KEGGicel:CELE_F46A9.5.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
Z81084 , Z81072 Genomic DNA. Translation: CAB03110.1 .
PIRi T21573.
RefSeqi NP_492513.1. NM_060112.5.
UniGenei Cel.18311.

3D structure databases

ProteinModelPortali G5ECU1.
SMRi G5ECU1. Positions 16-174.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

IntActi G5ECU1. 19 interactions.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai F46A9.5.1 ; F46A9.5.1 ; WBGene00004807 .
F46A9.5.2 ; F46A9.5.2 ; WBGene00004807 .
F46A9.5.3 ; F46A9.5.3 ; WBGene00004807 .
GeneIDi 172775.
KEGGi cel:CELE_F46A9.5.

Organism-specific databases

CTDi 172775.
WormBasei F46A9.5 ; CE10580 ; WBGene00004807 ; skr-1.

Phylogenomic databases

GeneTreei ENSGT00390000012652.
InParanoidi G5ECU1.
KOi K03094.
OMAi VIQWCTY.
PhylomeDBi G5ECU1.

Enzyme and pathway databases

Reactomei REACT_205379. SCF-beta-TrCP mediated degradation of Emi1.
REACT_219545. Cyclin D associated events in G1.

Miscellaneous databases

NextBioi 876957.
PROi G5ECU1.

Gene expression databases

ExpressionAtlasi G5ECU1. baseline.

Family and domain databases

Gene3Di 3.30.710.10. 1 hit.
InterProi IPR011333. BTB/POZ_fold.
IPR016897. E3_ubiquit_lig_SCF_Skp.
IPR001232. Skp1_comp.
IPR016072. Skp1_comp_dimer.
IPR016073. Skp1_comp_POZ.
[Graphical view ]
PANTHERi PTHR11165. PTHR11165. 1 hit.
Pfami PF01466. Skp1. 1 hit.
PF03931. Skp1_POZ. 1 hit.
[Graphical view ]
PIRSFi PIRSF028729. E3_ubiquit_lig_SCF_Skp. 1 hit.
SMARTi SM00512. Skp1. 1 hit.
[Graphical view ]
SUPFAMi SSF54695. SSF54695. 1 hit.
SSF81382. SSF81382. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Genome sequence of the nematode C. elegans: a platform for investigating biology."
    The C. elegans sequencing consortium
    Science 282:2012-2018(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Bristol N2Imported.

Entry informationi

Entry nameiG5ECU1_CAEEL
AccessioniPrimary (citable) accession number: G5ECU1
Entry historyi
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: October 29, 2014
This is version 29 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3