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G5E8R2

- G5E8R2_MOUSE

UniProt

G5E8R2 - G5E8R2_MOUSE

Protein
Submitted name:

Tropomyosin 1, alpha, isoform CRA_k

Gene

Tpm1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
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    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (14 Dec 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. structural constituent of cytoskeleton Source: MGI

    GO - Biological processi

    1. in utero embryonic development Source: MGI

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Tropomyosin 1, alpha, isoform CRA_kImported
    Submitted name:
    Tropomyosin alpha-1 chainImported
    Gene namesi
    Name:Tpm1Imported
    ORF Names:mCG_1234Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 9

    Organism-specific databases

    MGIiMGI:98809. Tpm1.

    Subcellular locationi

    GO - Cellular componenti

    1. cytoplasm Source: MGI
    2. muscle thin filament tropomyosin Source: MGI
    3. myofibril Source: MGI

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the tropomyosin family.UniRule annotation

    Keywords - Domaini

    Coiled coilSAAS annotation

    Phylogenomic databases

    GeneTreeiENSGT00550000074494.
    KOiK10373.

    Family and domain databases

    InterProiIPR000533. Tropomyosin.
    [Graphical view]
    PfamiPF00261. Tropomyosin. 1 hit.
    [Graphical view]
    PRINTSiPR00194. TROPOMYOSIN.
    PROSITEiPS00326. TROPOMYOSIN. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G5E8R2-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAGSSSLEAV RRKIRSLQEQ ADAAEERAGS LQRELDQERK LRETAEADVA    50
    SLNRRIQLVE EELDRAQERL ATALQKLEEA EKAADESERG MKVIESRAQK 100
    DEEKMEIQEI QLKEAKHIAE DADRKYEEVA RKLVIIESDL ERAEERAELS 150
    EGQVRQLEEQ LRIMDQTLKA LMAAEDKYSQ KEDKYEEEIK VLSDKLKEAE 200
    TRAEFAERSV TKLEKSIDDL EEKVAHAKEE NLSMHQMLDQ TLLELNNM 248
    Length:248
    Mass (Da):28,696
    Last modified:December 14, 2011 - v1
    Checksum:i1AC8EB7131E5F251
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC166370 Genomic DNA. No translation available.
    CH466522 Genomic DNA. Translation: EDL26150.1.
    RefSeqiNP_001157725.1. NM_001164253.1.
    UniGeneiMm.121878.

    Genome annotation databases

    EnsembliENSMUST00000113696; ENSMUSP00000109326; ENSMUSG00000032366.
    GeneIDi22003.
    KEGGimmu:22003.
    UCSCiuc012gvs.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC166370 Genomic DNA. No translation available.
    CH466522 Genomic DNA. Translation: EDL26150.1 .
    RefSeqi NP_001157725.1. NM_001164253.1.
    UniGenei Mm.121878.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000113696 ; ENSMUSP00000109326 ; ENSMUSG00000032366 .
    GeneIDi 22003.
    KEGGi mmu:22003.
    UCSCi uc012gvs.1. mouse.

    Organism-specific databases

    CTDi 7168.
    MGIi MGI:98809. Tpm1.

    Phylogenomic databases

    GeneTreei ENSGT00550000074494.
    KOi K10373.

    Miscellaneous databases

    ChiTaRSi TPM1. mouse.
    NextBioi 301732.
    SOURCEi Search...

    Family and domain databases

    InterProi IPR000533. Tropomyosin.
    [Graphical view ]
    Pfami PF00261. Tropomyosin. 1 hit.
    [Graphical view ]
    PRINTSi PR00194. TROPOMYOSIN.
    PROSITEi PS00326. TROPOMYOSIN. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
      Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
      , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
      Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    2. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
      Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    4. Ensembl
      Submitted (OCT-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiG5E8R2_MOUSE
    AccessioniPrimary (citable) accession number: G5E8R2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 14, 2011
    Last sequence update: December 14, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3