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Protein
Submitted name:

RNA-binding protein 40

Gene

GW7_16151

Organism
Heterocephalus glaber (Naked mole rat)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

  1. nucleic acid binding Source: InterPro
  2. nucleotide binding Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
RNA-binding protein 40Imported
Gene namesi
ORF Names:GW7_16151Imported
OrganismiHeterocephalus glaber (Naked mole rat)Imported
Taxonomic identifieri10181 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaHystricognathiBathyergidaeHeterocephalus
ProteomesiUP000006813: Unassembled WGS sequence

Family & Domainsi

Phylogenomic databases

InParanoidiG5AZM5.
KOiK01176.

Family and domain databases

Gene3Di3.30.70.330. 2 hits.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00076. RRM_1. 2 hits.
[Graphical view]
SMARTiSM00360. RRM. 2 hits.
[Graphical view]
PROSITEiPS50102. RRM. 2 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G5AZM5-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAAPEQPLPL SRRCPSSTSL SPPRGDRTLL VRHLPAELSP EEKEDLLKYF
60 70 80 90 100
GAQSVRVLSD KGRLKHTAFA TFPNEKAAIK ALTRLHQLKL LGHTLVVEFA
110 120 130 140 150
KEQDQVHSPC PTSGTEKKKR SDDTIEDDKE KKEFGCLTVE NGIAPNHGLT
160 170 180 190 200
FPLNSCLKYM YPPPSSTILA NIVNALASVP KFYVQVLHLM NKMNLPTPFG
210 220 230 240 250
PITARPPMYE DYVPLHAPLP PTSPRPPEEP PLPDEDEELS SKESEYESSD
260 270 280 290 300
EEDRQRMSKL MELANLQPKR PKITKQRHVR KKQKIKDMLN LSSSASHSNL
310 320 330 340 350
HPVLLPSDVF DQPQPVGSKR IEFHISTDMP NVFKKDLQKE QNCEEKCYDL
360 370 380 390 400
PAIEVEASNI GFGKIFPKPN TNITEESKED SDEMPSECIS RRELEKGRIS
410 420 430 440 450
REEMESLSVF RSYEPGEPNC RIYVKNLAKH VQEKDLKFIF GRYVDFSSET
460 470 480 490 500
QRIMFDIRLM KEGRMKGQAF IGLPNEKAAA KALKEANGYI LFGKPMVVQF
510
ARSARPKQDS KEGKRKC
Length:517
Mass (Da):58,620
Last modified:December 14, 2011 - v1
Checksum:iA00CBA4D12741971
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JH167687 Genomic DNA. Translation: EHB02486.1.
RefSeqiXP_004869213.1. XM_004869156.1.
XP_004883995.1. XM_004883938.1.
XP_004883996.1. XM_004883939.1.

Genome annotation databases

GeneIDi101703023.
KEGGihgl:101703023.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
JH167687 Genomic DNA. Translation: EHB02486.1.
RefSeqiXP_004869213.1. XM_004869156.1.
XP_004883995.1. XM_004883938.1.
XP_004883996.1. XM_004883939.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi101703023.
KEGGihgl:101703023.

Organism-specific databases

CTDi55599.

Phylogenomic databases

InParanoidiG5AZM5.
KOiK01176.

Family and domain databases

Gene3Di3.30.70.330. 2 hits.
InterProiIPR012677. Nucleotide-bd_a/b_plait.
IPR000504. RRM_dom.
[Graphical view]
PfamiPF00076. RRM_1. 2 hits.
[Graphical view]
SMARTiSM00360. RRM. 2 hits.
[Graphical view]
PROSITEiPS50102. RRM. 2 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].

Entry informationi

Entry nameiG5AZM5_HETGA
AccessioniPrimary (citable) accession number: G5AZM5
Entry historyi
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: January 7, 2015
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.