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G4VTC9 (G4VTC9_SCHMA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 16. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Smp_068280 EMBL CCD81995.1
OrganismSchistosoma mansoni (Blood fluke) [Reference proteome] EMBL CCD81995.1
Taxonomic identifier6183 [NCBI]
Taxonomic lineageEukaryotaMetazoaPlatyhelminthesTrematodaDigeneaStrigeididaSchistosomatoideaSchistosomatidaeSchistosoma

Protein attributes

Sequence length584 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
G4VTC9 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: 8A6FCA4BEF3A47AB

FASTA58466,246
        10         20         30         40         50         60 
MALLSFTVTW LLLFQQKYIN AEYYTAVVDI TKAWRLSQEL VSDLNSYIAL EEGRLNRIRK 

        70         80         90        100        110        120 
VVKVLDSNGS ISDASSTLNQ QNNDLEEYLG NPINAYLTMK RLSSSWKSQL SQLVDNVPNG 

       130        140        150        160        170        180 
FQKGDTDGSD YLNISDAQNT ITMNTIRSRV KQHTDMLPGD NDVSGAVDAI LRLQSTYKLP 

       190        200        210        220        230        240 
ARRLAYGQLI DNLSTPQLSA AQCLEVGRHA YLQGDFEQSE EWFRVAYDRL FDELEEKREV 

       250        260        270        280        290        300 
DAQGTTIAND ETEENGETEP TVGQILDYLA YSLGRQGRYA EALNVTRLLI EEEPTNTRAI 

       310        320        330        340        350        360 
NNEAYYVEQI DRGEGRIGPN PRSQAISKHD QETELYESLC RNENPFPTVP SHHLTCRYYT 

       370        380        390        400        410        420 
PHAFFKIGPV KEETLNPDPR IVMWYDLIFP SEIEKIKELA TPRLRRATVK NPVTGILEIA 

       430        440        450        460        470        480 
FYRTSKSAWL PHSMSEITDQ ISQRIRAVTG LSLETAEDLQ VGNYGLGGHY APHFDFGRKR 

       490        500        510        520        530        540 
EKDAFEVKNG NRIATIIFYL SDVQAGGATV FNRIGTRVVP KKGAAGFWFN LLPNGEGDLR 

       550        560        570        580 
TRHAACPVLA GSKWVMNLWF HERGQEFRRP CELERGTVET DDDF 

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References

[1]"A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni."
Protasio A.V., Tsai I.J., Babbage A., Nichol S., Hunt M., Aslett M.A., De Silva N., Velarde G.S., Anderson T.J., Clark R.C., Davidson C., Dillon G.P., Holroyd N.E., LoVerde P.T., Lloyd C., McQuillan J., Oliveira G., Otto T.D. expand/collapse author list , Parker-Manuel S.J., Quail M.A., Wilson R.A., Zerlotini A., Dunne D.W., Berriman M.
PLoS Negl. Trop. Dis. 6:E1455-E1455(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Puerto Rican.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE601631 Genomic DNA. Translation: CCD81995.1.
UniGeneSma.7028.

3D structure databases

ProteinModelPortalG4VTC9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaSmp_068280.1; Smp_068280.1:pep; Smp_068280.
KEGGsmm:Smp_068280.

Organism-specific databases

CTD8354649.

Phylogenomic databases

KOK00472.
OMALLGNKWV.
PhylomeDBG4VTC9.

Family and domain databases

Gene3D1.25.40.10. 1 hit.
InterProIPR005123. Oxoglu/Fe-dep_dioxygenase.
IPR006620. Pro_4_hyd_alph.
IPR013547. Pro_4_hyd_alph_N.
IPR011990. TPR-like_helical.
[Graphical view]
PfamPF03171. 2OG-FeII_Oxy. 1 hit.
PF08336. P4Ha_N. 2 hits.
[Graphical view]
SMARTSM00702. P4Hc. 1 hit.
[Graphical view]
PROSITEPS51471. FE2OG_OXY. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG4VTC9_SCHMA
AccessionPrimary (citable) accession number: G4VTC9
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: July 9, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)