G4VSQ4 (G4VSQ4_SCHMA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative anaphase-promoting complex subunit EMBL CCD81895.1

Gene names

ORF Names:

Smp_152400 EMBL CCD81895.1

Organism

Schistosoma mansoni (Blood fluke) [Reference proteome]

Taxonomic identifier

6183 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Platyhelminthes › Trematoda › Digenea › Strigeidida › Schistosomatoidea › Schistosomatidae › Schistosoma

Protein attributes

Sequence length	781 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the cullin family. RuleBase RU003829

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
Biological_process	ubiquitin-dependent protein catabolic process Inferred from electronic annotation. Source: InterPro
Cellular_component	cullin-RING ubiquitin ligase complex Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G4VSQ4 [UniParc]. Last modified December 14, 2011. Version 1. Checksum: E9DFCB519F5EF4F0	FASTA	781	90,399
	10 20 30 40 50 60 MSSSLHNDLR GVFGCDAIDS CFCKELFFEQ IVYFLQTSSL ASQLSTLVEE CNCLVNISTI 70 80 90 100 110 120 NLYHTLDDDN DLLRLLCLFI KLIDNLNDEL SAYLGSILDS SLESIMNDNR IMSDVQCLVT 130 140 150 160 170 180 SVLSSLKCEN FLQPLWHSYL CLELESAEMD TEESNIFSSI ICPNITDRKM QILLSARNLT 190 200 210 220 230 240 HNRSLITWNN LYRHLCAPYI KEALSYRTKL LCSENYTERF LDSIIKYKNC VLKKVLIPRL 250 260 270 280 290 300 FSRKSDIHEI NAELSDEIVY KTFYLVHKPD MFSLVIEYPD SVAALMDLGK CLDHLPIRQD 310 320 330 340 350 360 LITHLTEEVQ QRLLHPGVHT EQILAAYNYL VRALRLVDNT FLVQDIVCKP VSTCLRQRED 370 380 390 400 410 420 AVRCIVDKLI SGPETDDPPF DSDIHSANSD KHFLLESDWK PDPIEALCQR GSWRRKLDLL 430 440 450 460 470 480 SMLVSIYGSK KAFLVEYKQL LSQRLLRQRS FHTARELRNL ELLKLRFGEQ NLHECEVMLK 490 500 510 520 530 540 DIRDSKRIAN LVSEATNLSN NNVNNIAFPL SAYILSIHYW PELLDDKFKI PEDFRPVFEH 550 560 570 580 590 600 YEQCFQRLKG NRTLVWMHKL GLVNIDLTLG KRSVKIDVTP LQVSIVHLFT KQRTWYIRDL 610 620 630 640 650 660 AQKLESQIST IRTSLYMFIQ LGFIRLSDSH DSNNHVNFTS ENLEIYGVCD ETDTTNSDER 670 680 690 700 710 720 LSNSNSKNYS NDPEKIDSNT IEATNNWMFT SQDHSDSLVA SVRERKEKEL QVFWSYITAM 730 740 750 760 770 780 LTNLGSSSLD RIHSMLRMFA LGSTSSLGFN RDELRRFLDK KIREGQLSYD GDMYKLTIPD V

References

[1]

"A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni." Protasio A.V., Tsai I.J., Babbage A., Nichol S., Hunt M., Aslett M.A., De Silva N., Velarde G.S., Anderson T.J., Clark R.C., Davidson C., Dillon G.P., Holroyd N.E., LoVerde P.T., Lloyd C., McQuillan J., Oliveira G., Otto T.D. , Parker-Manuel S.J., Quail M.A., Wilson R.A., Zerlotini A., Dunne D.W., Berriman M. PLoS Negl. Trop. Dis. 6:E1455-E1455(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Puerto Rican.

Cross-references

Sequence databases
EMBL GenBank DDBJ	HE601631 Genomic DNA. Translation: CCD81895.1.
RefSeq	XP_002576933.1. XM_002576887.1.
UniGene	Sma.16141.
3D structure databases
ProteinModelPortal	G4VSQ4.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8344989.
KEGG	smm:Smp_152400.
Organism-specific databases
CTD	8344989.
Phylogenomic databases
KO	K03349.
OMA	HEINAEL.
PhylomeDB	G4VSQ4.
Family and domain databases
Gene3D	1.10.10.10. 1 hit.
InterPro	IPR014786. APC_su2_C. IPR016158. Cullin_homology. IPR001373. Cullin_N. IPR011991. WHTH_DNA-bd_dom. [Graphical view]
Pfam	PF08672. APC2. 1 hit. PF00888. Cullin. 1 hit. [Graphical view]
SMART	SM01013. APC2. 1 hit. SM00182. CULLIN. 1 hit. [Graphical view]
SUPFAM	SSF75632. Cullin_homology. 1 hit.
PROSITE	PS50069. CULLIN_2. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G4VSQ4_SCHMA

Accession

Primary (citable) accession number: G4VSQ4

Entry history

Integrated into UniProtKB/TrEMBL:	December 14, 2011
Last sequence update:	December 14, 2011
Last modified:	May 1, 2013
This is version 12 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)