G4VQW0 (G4VQW0_SCHMA) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Putative cell adhesion molecule EMBL CCD82601.1

Gene names

ORF Names:

Smp_171460 EMBL CCD82601.1

Organism

Schistosoma mansoni (Blood fluke) [Reference proteome]

Taxonomic identifier

6183 [NCBI]

Taxonomic lineage

cellular organisms › Eukaryota › Opisthokonta › Metazoa › Eumetazoa › Bilateria › Platyhelminthes › Trematoda › Digenea › Strigeidida › Schistosomatoidea › Schistosomatidae › Schistosoma

Protein attributes

Sequence length	868 AA.
Sequence status	Complete.
Protein existence	Predicted

Ontologies

Keywords
Technical term	Complete proteome Reference proteome
Gene Ontology (GO)
None. [Check GOA]

Sequences

	Sequence		Length	Mass (Da)
	G4VQW0 [UniParc]. Last modified December 14, 2011. Version 1. Checksum: EA4DDBD38470C916	FASTA	868	97,162
	10 20 30 40 50 60 MRLPLVVSVI VGVVVSSALN IKEVDVDGNY YVQWGDNLAL TCAQDTPPFG KASIDWFLPS 70 80 90 100 110 120 QLNRPVGYGN KAHVYRQDQL DSMVLVLVVR SVNTDDSGTY TCRTGRQEGN QFIEMGRKSV 130 140 150 160 170 180 NVIVRKSIVA TDCPRDQWIP VSGEITNCWG NGTECGVPTA TVRCIIEAFP APTIHWRFKG 190 200 210 220 230 240 VQLTTGTKYI ITTFGITIIN PTTEDSGIYT VIARQPQQTA VFDLQISAFS RPRITSGPSI 250 260 270 280 290 300 VRTHNNTFVS GREAYLQCLA SGQPPPTIHW YHERDPQTEL QKANPKKFSV NTNFRVGLLW 310 320 330 340 350 360 ISEVSYPEDS GSYICRAVIP VPATYSDSTL VTTTEAQIPI EVTLPPTLIP LTTMHSYVEL 370 380 390 400 410 420 GGTATVQCRV RATTPLELYF KRFNSSTPYI SGVQPGDKRI RVWREGDMND PLNHDLFLTI 430 440 450 460 470 480 ENTTIDDTWN YSCHAVNQGN SSWWNTTIQV IQTPQILLHS TLNTDSELSG LRFGWRYQGT 490 500 510 520 530 540 NLTCISHGMP HPTWTWYRRG EQILNGQNLT FVIISYDYWD HSQSWLQITP CLYTEHFIYD 550 560 570 580 590 600 DYVCKATNIK GTNESKVSFR RASVPGQPRL ESYSVTQSTI FLNVSPPINT GGMPTLAYEF 610 620 630 640 650 660 TYRAFGGPEG WYGPVTYPLD GSRSSGKPKF ELTGLLGDTN YQLKLSACSI VGRGIPYSFS 670 680 690 700 710 720 TTTASSTRPG PVEVIHSATG IYPYGHVVNW IPPMSGGSPI LGYRIRVRSV ENALNLISMV 730 740 750 760 770 780 ENISPSSSWK VYTPSFNNPY MDYYHLAPLK PDQTYQLIVE AYNRHGYSLD GVDIEQYGYL 790 800 810 820 830 840 NRTPTSTPQL QQIFPGERLN YQNSDKLSNS VNSLMNFKQS DLVPIWYLFA TPSADELDPP 850 860 SLMFNGSSST YKSYQLISRA NFGQTTVE

References

[1]

"A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni." Protasio A.V., Tsai I.J., Babbage A., Nichol S., Hunt M., Aslett M.A., De Silva N., Velarde G.S., Anderson T.J., Clark R.C., Davidson C., Dillon G.P., Holroyd N.E., LoVerde P.T., Lloyd C., McQuillan J., Oliveira G., Otto T.D. , Parker-Manuel S.J., Quail M.A., Wilson R.A., Zerlotini A., Dunne D.W., Berriman M. PLoS Negl. Trop. Dis. 6:E1455-E1455(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: Puerto Rican.

Cross-references

Sequence databases
EMBL GenBank DDBJ	HE601631 Genomic DNA. Translation: CCD82601.1.
RefSeq	XP_002580049.1. XM_002580003.1.
3D structure databases
ProteinModelPortal	G4VQW0.
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	8355938.
KEGG	smm:Smp_171460.
Organism-specific databases
CTD	8355938.
Phylogenomic databases
KO	K06491.
OMA	LLWISEV.
PhylomeDB	G4VQW0.
Family and domain databases
Gene3D	2.60.40.10. 7 hits.
InterPro	IPR003961. Fibronectin_type3. IPR007110. Ig-like_dom. IPR013783. Ig-like_fold. IPR003599. Ig_sub. IPR003598. Ig_sub2. [Graphical view]
Pfam	PF00041. fn3. 1 hit. [Graphical view]
SMART	SM00060. FN3. 2 hits. SM00409. IG. 3 hits. SM00408. IGc2. 1 hit. [Graphical view]
SUPFAM	SSF49265. FN_III-like. 2 hits.
PROSITE	PS50853. FN3. 2 hits. PS50835. IG_LIKE. 4 hits. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G4VQW0_SCHMA

Accession

Primary (citable) accession number: G4VQW0

Entry history

Integrated into UniProtKB/TrEMBL:	December 14, 2011
Last sequence update:	December 14, 2011
Last modified:	March 6, 2013
This is version 10 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)