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G4VNE9

- G4VNE9_SCHMA

UniProt

G4VNE9 - G4VNE9_SCHMA

Protein
Submitted name:

Putative uv excision repair protein rad23

Gene

Smp_061920.2

Organism
Schistosoma mansoni (Blood fluke)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 22 (01 Oct 2014)
      Sequence version 1 (14 Dec 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. damaged DNA binding Source: InterPro

    GO - Biological processi

    1. nucleotide-excision repair Source: InterPro
    2. proteasome-mediated ubiquitin-dependent protein catabolic process Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Putative uv excision repair protein rad23Imported
    Gene namesi
    ORF Names:Smp_061920.2Imported
    OrganismiSchistosoma mansoni (Blood fluke)Imported
    Taxonomic identifieri6183 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaPlatyhelminthesTrematodaDigeneaStrigeididaSchistosomatoideaSchistosomatidaeSchistosoma
    ProteomesiUP000008854: Chromosome W

    Subcellular locationi

    GO - Cellular componenti

    1. nucleus Source: InterPro

    Structurei

    3D structure databases

    ProteinModelPortaliG4VNE9.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK10839.
    PhylomeDBiG4VNE9.

    Family and domain databases

    Gene3Di1.10.10.540. 1 hit.
    InterProiIPR004806. Rad23.
    IPR006636. STI1_HS-bd.
    IPR009060. UBA-like.
    IPR015940. UBA/transl_elong_EF1B_N_euk.
    IPR000449. UBA/Ts_N.
    IPR000626. Ubiquitin-like.
    IPR029071. Ubiquitin-rel_dom.
    IPR015360. XPC-bd.
    [Graphical view]
    PfamiPF00627. UBA. 2 hits.
    PF00240. ubiquitin. 1 hit.
    PF09280. XPC-binding. 1 hit.
    [Graphical view]
    PRINTSiPR01839. RAD23PROTEIN.
    SMARTiSM00727. STI1. 1 hit.
    SM00165. UBA. 2 hits.
    SM00213. UBQ. 1 hit.
    [Graphical view]
    SUPFAMiSSF101238. SSF101238. 1 hit.
    SSF46934. SSF46934. 2 hits.
    SSF54236. SSF54236. 1 hit.
    TIGRFAMsiTIGR00601. rad23. 1 hit.
    PROSITEiPS50030. UBA. 2 hits.
    PS50053. UBIQUITIN_2. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G4VNE9-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKVTFKTLMQ QTFVLDFQED DLIGDVKKKI EAKWGSEFDA RTQKLIHSGK    50
    VMEDSKSLKD YKVTESGFVV VMSVSKPSKD TTKEASASVQ SNPTGETKPT 100
    TDKKSPVTEA NEAPSITTAP SSATSTLGFG ESSLVTGENF ERVVKELMSM 150
    GFERSLVIQA MRAGFNNPDR AFEYLSSGNI PNVDIVDQSR EREESESVSP 200
    EGPGDTDTPG SESLGSEDPI AALASLPQFQ QMRALVQANP ELLPQLIQQI 250
    GNDNADLFRL IQENEQAFLE FINTPVTGTT RPGSQRQTVL TMTAEERAAV 300
    DRLKALGFPE ELVIQAYYAC EKNEDAAANF LLSESLDDEM V 341
    Length:341
    Mass (Da):37,356
    Last modified:December 14, 2011 - v1
    Checksum:i46698109C9C9DCF8
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE601631 Genomic DNA. Translation: CCD82179.1.

    Genome annotation databases

    EnsemblMetazoaiSmp_061920.2; Smp_061920.2:pep; Smp_061920.
    KEGGismm:Smp_061920.2.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    HE601631 Genomic DNA. Translation: CCD82179.1 .

    3D structure databases

    ProteinModelPortali G4VNE9.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblMetazoai Smp_061920.2 ; Smp_061920.2:pep ; Smp_061920 .
    KEGGi smm:Smp_061920.2.

    Phylogenomic databases

    KOi K10839.
    PhylomeDBi G4VNE9.

    Family and domain databases

    Gene3Di 1.10.10.540. 1 hit.
    InterProi IPR004806. Rad23.
    IPR006636. STI1_HS-bd.
    IPR009060. UBA-like.
    IPR015940. UBA/transl_elong_EF1B_N_euk.
    IPR000449. UBA/Ts_N.
    IPR000626. Ubiquitin-like.
    IPR029071. Ubiquitin-rel_dom.
    IPR015360. XPC-bd.
    [Graphical view ]
    Pfami PF00627. UBA. 2 hits.
    PF00240. ubiquitin. 1 hit.
    PF09280. XPC-binding. 1 hit.
    [Graphical view ]
    PRINTSi PR01839. RAD23PROTEIN.
    SMARTi SM00727. STI1. 1 hit.
    SM00165. UBA. 2 hits.
    SM00213. UBQ. 1 hit.
    [Graphical view ]
    SUPFAMi SSF101238. SSF101238. 1 hit.
    SSF46934. SSF46934. 2 hits.
    SSF54236. SSF54236. 1 hit.
    TIGRFAMsi TIGR00601. rad23. 1 hit.
    PROSITEi PS50030. UBA. 2 hits.
    PS50053. UBIQUITIN_2. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: Puerto RicanImported.

    Entry informationi

    Entry nameiG4VNE9_SCHMA
    AccessioniPrimary (citable) accession number: G4VNE9
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 14, 2011
    Last sequence update: December 14, 2011
    Last modified: October 1, 2014
    This is version 22 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3