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G4VNE9

- G4VNE9_SCHMA

UniProt

G4VNE9 - G4VNE9_SCHMA

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Protein
Submitted name: Putative uv excision repair protein rad23
Gene
Smp_061920.2
Organism
Schistosoma mansoni (Blood fluke)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. damaged DNA binding Source: InterPro
Complete GO annotation...

GO - Biological processi

  1. nucleotide-excision repair Source: InterPro
  2. proteasome-mediated ubiquitin-dependent protein catabolic process Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uv excision repair protein rad23Imported
Gene namesi
ORF Names:Smp_061920.2Imported
OrganismiSchistosoma mansoni (Blood fluke)Imported
Taxonomic identifieri6183 [NCBI]
Taxonomic lineageiEukaryotaMetazoaPlatyhelminthesTrematodaDigeneaStrigeididaSchistosomatoideaSchistosomatidaeSchistosoma
ProteomesiUP000008854: Chromosome W

Subcellular locationi

GO - Cellular componenti

  1. nucleus Source: InterPro
Complete GO annotation...

Structurei

3D structure databases

ProteinModelPortaliG4VNE9.

Family & Domainsi

Phylogenomic databases

KOiK10839.
PhylomeDBiG4VNE9.

Family and domain databases

Gene3Di1.10.10.540. 1 hit.
InterProiIPR004806. Rad23.
IPR006636. STI1_HS-bd.
IPR009060. UBA-like.
IPR015940. UBA/transl_elong_EF1B_N_euk.
IPR000449. UBA/Ts_N.
IPR000626. Ubiquitin-like.
IPR029071. Ubiquitin-rel_dom.
IPR015360. XPC-bd.
[Graphical view]
PfamiPF00627. UBA. 2 hits.
PF00240. ubiquitin. 1 hit.
PF09280. XPC-binding. 1 hit.
[Graphical view]
PRINTSiPR01839. RAD23PROTEIN.
SMARTiSM00727. STI1. 1 hit.
SM00165. UBA. 2 hits.
SM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMiSSF101238. SSF101238. 1 hit.
SSF46934. SSF46934. 2 hits.
SSF54236. SSF54236. 1 hit.
TIGRFAMsiTIGR00601. rad23. 1 hit.
PROSITEiPS50030. UBA. 2 hits.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G4VNE9-1 [UniParc]FASTAAdd to Basket

« Hide

MKVTFKTLMQ QTFVLDFQED DLIGDVKKKI EAKWGSEFDA RTQKLIHSGK    50
VMEDSKSLKD YKVTESGFVV VMSVSKPSKD TTKEASASVQ SNPTGETKPT 100
TDKKSPVTEA NEAPSITTAP SSATSTLGFG ESSLVTGENF ERVVKELMSM 150
GFERSLVIQA MRAGFNNPDR AFEYLSSGNI PNVDIVDQSR EREESESVSP 200
EGPGDTDTPG SESLGSEDPI AALASLPQFQ QMRALVQANP ELLPQLIQQI 250
GNDNADLFRL IQENEQAFLE FINTPVTGTT RPGSQRQTVL TMTAEERAAV 300
DRLKALGFPE ELVIQAYYAC EKNEDAAANF LLSESLDDEM V 341
Length:341
Mass (Da):37,356
Last modified:December 14, 2011 - v1
Checksum:i46698109C9C9DCF8
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE601631 Genomic DNA. Translation: CCD82179.1.

Genome annotation databases

EnsemblMetazoaiSmp_061920.2; Smp_061920.2:pep; Smp_061920.
KEGGismm:Smp_061920.2.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
HE601631 Genomic DNA. Translation: CCD82179.1 .

3D structure databases

ProteinModelPortali G4VNE9.
ModBasei Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblMetazoai Smp_061920.2 ; Smp_061920.2:pep ; Smp_061920 .
KEGGi smm:Smp_061920.2.

Phylogenomic databases

KOi K10839.
PhylomeDBi G4VNE9.

Family and domain databases

Gene3Di 1.10.10.540. 1 hit.
InterProi IPR004806. Rad23.
IPR006636. STI1_HS-bd.
IPR009060. UBA-like.
IPR015940. UBA/transl_elong_EF1B_N_euk.
IPR000449. UBA/Ts_N.
IPR000626. Ubiquitin-like.
IPR029071. Ubiquitin-rel_dom.
IPR015360. XPC-bd.
[Graphical view ]
Pfami PF00627. UBA. 2 hits.
PF00240. ubiquitin. 1 hit.
PF09280. XPC-binding. 1 hit.
[Graphical view ]
PRINTSi PR01839. RAD23PROTEIN.
SMARTi SM00727. STI1. 1 hit.
SM00165. UBA. 2 hits.
SM00213. UBQ. 1 hit.
[Graphical view ]
SUPFAMi SSF101238. SSF101238. 1 hit.
SSF46934. SSF46934. 2 hits.
SSF54236. SSF54236. 1 hit.
TIGRFAMsi TIGR00601. rad23. 1 hit.
PROSITEi PS50030. UBA. 2 hits.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: Puerto Rican.

Entry informationi

Entry nameiG4VNE9_SCHMA
AccessioniPrimary (citable) accession number: G4VNE9
Entry historyi
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: September 3, 2014
This is version 21 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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