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G4VNE9 (G4VNE9_SCHMA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 18. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Smp_061920.2 EMBL CCD82179.1
OrganismSchistosoma mansoni (Blood fluke) [Reference proteome] EMBL CCD82179.1
Taxonomic identifier6183 [NCBI]
Taxonomic lineageEukaryotaMetazoaPlatyhelminthesTrematodaDigeneaStrigeididaSchistosomatoideaSchistosomatidaeSchistosoma

Protein attributes

Sequence length341 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
G4VNE9 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: 46698109C9C9DCF8

FASTA34137,356
        10         20         30         40         50         60 
MKVTFKTLMQ QTFVLDFQED DLIGDVKKKI EAKWGSEFDA RTQKLIHSGK VMEDSKSLKD 

        70         80         90        100        110        120 
YKVTESGFVV VMSVSKPSKD TTKEASASVQ SNPTGETKPT TDKKSPVTEA NEAPSITTAP 

       130        140        150        160        170        180 
SSATSTLGFG ESSLVTGENF ERVVKELMSM GFERSLVIQA MRAGFNNPDR AFEYLSSGNI 

       190        200        210        220        230        240 
PNVDIVDQSR EREESESVSP EGPGDTDTPG SESLGSEDPI AALASLPQFQ QMRALVQANP 

       250        260        270        280        290        300 
ELLPQLIQQI GNDNADLFRL IQENEQAFLE FINTPVTGTT RPGSQRQTVL TMTAEERAAV 

       310        320        330        340 
DRLKALGFPE ELVIQAYYAC EKNEDAAANF LLSESLDDEM V 

« Hide

References

[1]"A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni."
Protasio A.V., Tsai I.J., Babbage A., Nichol S., Hunt M., Aslett M.A., De Silva N., Velarde G.S., Anderson T.J., Clark R.C., Davidson C., Dillon G.P., Holroyd N.E., LoVerde P.T., Lloyd C., McQuillan J., Oliveira G., Otto T.D. expand/collapse author list , Parker-Manuel S.J., Quail M.A., Wilson R.A., Zerlotini A., Dunne D.W., Berriman M.
PLoS Negl. Trop. Dis. 6:E1455-E1455(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Puerto Rican.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE601631 Genomic DNA. Translation: CCD82179.1.
RefSeqXP_002577465.1. XM_002577419.1.

3D structure databases

ProteinModelPortalG4VNE9.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaSmp_061920.2; Smp_061920.2:pep; Smp_061920.
GeneID8347604.
KEGGsmm:Smp_061920.2.

Organism-specific databases

CTD8347604.

Phylogenomic databases

KOK10839.
PhylomeDBG4VNE9.

Family and domain databases

Gene3D1.10.10.540. 1 hit.
InterProIPR004806. Rad23.
IPR006636. STI1_HS-bd.
IPR009060. UBA-like.
IPR015940. UBA/transl_elong_EF1B_N_euk.
IPR000449. UBA/Ts_N.
IPR000626. Ubiquitin-like.
IPR015360. XPC-bd.
[Graphical view]
PfamPF00627. UBA. 2 hits.
PF00240. ubiquitin. 1 hit.
PF09280. XPC-binding. 1 hit.
[Graphical view]
PRINTSPR01839. RAD23PROTEIN.
SMARTSM00727. STI1. 1 hit.
SM00165. UBA. 2 hits.
SM00213. UBQ. 1 hit.
[Graphical view]
SUPFAMSSF101238. SSF101238. 1 hit.
SSF46934. SSF46934. 2 hits.
TIGRFAMsTIGR00601. rad23. 1 hit.
PROSITEPS50030. UBA. 2 hits.
PS50053. UBIQUITIN_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG4VNE9_SCHMA
AccessionPrimary (citable) accession number: G4VNE9
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: April 16, 2014
This is version 18 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)