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Protein
Submitted name:

Putative uv excision repair protein rad23

Gene

Smp_061920.2

Organism
Schistosoma mansoni (Blood fluke)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

GO - Biological processi

Names & Taxonomyi

Protein namesi
Submitted name:
Putative uv excision repair protein rad23Imported
Gene namesi
ORF Names:Smp_061920.2Imported
OrganismiSchistosoma mansoni (Blood fluke)Imported
Taxonomic identifieri6183 [NCBI]
Taxonomic lineageiEukaryotaMetazoaPlatyhelminthesTrematodaDigeneaStrigeididaSchistosomatoideaSchistosomatidaeSchistosoma
Proteomesi
  • UP000008854 Componenti: Chromosome W

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Expressioni

Gene expression databases

ExpressionAtlasiG4VNE9. baseline.

Structurei

3D structure databases

ProteinModelPortaliG4VNE9.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 72Ubiquitin-likeInterPro annotationAdd BLAST72
Domaini138 – 178UBAInterPro annotationAdd BLAST41
Domaini293 – 334UBAInterPro annotationAdd BLAST42

Phylogenomic databases

eggNOGiKOG0011. Eukaryota.
COG5272. LUCA.
InParanoidiG4VNE9.
PhylomeDBiG4VNE9.

Family and domain databases

InterProiView protein in InterPro
IPR004806. Rad23.
IPR006636. STI1_HS-bd.
IPR015940. UBA.
IPR009060. UBA-like_sf.
IPR029071. Ubiquitin-like_domsf.
IPR000626. Ubiquitin_dom.
IPR015360. XPC-bd.
IPR036353. XPC-bd_sf.
PfamiView protein in Pfam
PF00627. UBA. 2 hits.
PF00240. ubiquitin. 1 hit.
PF09280. XPC-binding. 1 hit.
PRINTSiPR01839. RAD23PROTEIN.
SMARTiView protein in SMART
SM00727. STI1. 1 hit.
SM00165. UBA. 2 hits.
SM00213. UBQ. 1 hit.
SUPFAMiSSF101238. SSF101238. 1 hit.
SSF46934. SSF46934. 2 hits.
SSF54236. SSF54236. 1 hit.
TIGRFAMsiTIGR00601. rad23. 1 hit.
PROSITEiView protein in PROSITE
PS50030. UBA. 2 hits.
PS50053. UBIQUITIN_2. 1 hit.

Sequencei

Sequence statusi: Complete.

G4VNE9-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKVTFKTLMQ QTFVLDFQED DLIGDVKKKI EAKWGSEFDA RTQKLIHSGK
60 70 80 90 100
VMEDSKSLKD YKVTESGFVV VMSVSKPSKD TTKEASASVQ SNPTGETKPT
110 120 130 140 150
TDKKSPVTEA NEAPSITTAP SSATSTLGFG ESSLVTGENF ERVVKELMSM
160 170 180 190 200
GFERSLVIQA MRAGFNNPDR AFEYLSSGNI PNVDIVDQSR EREESESVSP
210 220 230 240 250
EGPGDTDTPG SESLGSEDPI AALASLPQFQ QMRALVQANP ELLPQLIQQI
260 270 280 290 300
GNDNADLFRL IQENEQAFLE FINTPVTGTT RPGSQRQTVL TMTAEERAAV
310 320 330 340
DRLKALGFPE ELVIQAYYAC EKNEDAAANF LLSESLDDEM V
Length:341
Mass (Da):37,356
Last modified:December 14, 2011 - v1
Checksum:i46698109C9C9DCF8
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE601631 Genomic DNA. Translation: CCD82179.1.
RefSeqiXP_018654768.1. XM_018789311.1.
UniGeneiSma.1032.

Genome annotation databases

EnsemblMetazoaiSmp_061920.2; Smp_061920.2:pep; Smp_061920.
GeneDBiSmp_061920.2:pep.
GeneIDi8347603.

Similar proteinsi

Entry informationi

Entry nameiG4VNE9_SCHMA
AccessioniPrimary (citable) accession number: G4VNE9
Entry historyiIntegrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: November 22, 2017
This is version 43 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported