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G4VN20 (G4VN20_SCHMA) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.2.1.3 EMBL CCD81057.1
Gene names
ORF Names:Smp_022960 EMBL CCD81057.1
OrganismSchistosoma mansoni (Blood fluke) [Reference proteome]
Taxonomic identifier6183 [NCBI]
Taxonomic lineageEukaryotaMetazoaPlatyhelminthesTrematodaDigeneaStrigeididaSchistosomatoideaSchistosomatidaeSchistosoma

Protein attributes

Sequence length519 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the aldehyde dehydrogenase family. RuleBase RU003345

Ontologies

Sequences

Sequence LengthMass (Da)Tools
G4VN20 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: 33D03D7FB9F9AB45

FASTA51957,333
        10         20         30         40         50         60 
MVFLYSGSKI LGAQAITKNI CKFLGTTVEP ILKPEIKRNS IFINNEWVES SSGKTFDTIN 

        70         80         90        100        110        120 
PATGKVICQV SAGDKADIDK AVKAARKAFE FGSEWRTMDA SHRGVLLNKL ADLIERDRVY 

       130        140        150        160        170        180 
LASLETLDNG KPFADSYNID LDLVIKCYRY YAGWADKYHG KTIPVNGNYM CFTLHEPVGV 

       190        200        210        220        230        240 
CGQIIPWNFP LLMQAWKLGP ALATGNTVVM KTAEQTPLSA NWVAELIKEA GFPPGVVNIV 

       250        260        270        280        290        300 
PGFGETAGDA LVVHPDVDKI AFTGSTAVGR LIGQNAYKHG VKRITLELGG KSPLIIFSDG 

       310        320        330        340        350        360 
DFDRAIAASH FGLFFNQGQC CCASSRIFVE ESIYDKFVEY SSEEAKKRIV GNPFDLNTTQ 

       370        380        390        400        410        420 
GPQVDEHQFQ TVMSYIESGI KEGAKLCTGG KQFGSDGYFI RPTVFADVQD EMSIAREEIF 

       430        440        450        460        470        480 
GPVMQIMKFR SLDELIHRAN HTQYGLAAGI FTNNLEKAMH VMQHLQTGTV WINCYDVFDA 

       490        500        510 
AAPFGGYKFS GVGRELGEYS LRNYTEVKTV TTRILQKNS 

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References

[1]"A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni."
Protasio A.V., Tsai I.J., Babbage A., Nichol S., Hunt M., Aslett M.A., De Silva N., Velarde G.S., Anderson T.J., Clark R.C., Davidson C., Dillon G.P., Holroyd N.E., LoVerde P.T., Lloyd C., McQuillan J., Oliveira G., Otto T.D. expand/collapse author list , Parker-Manuel S.J., Quail M.A., Wilson R.A., Zerlotini A., Dunne D.W., Berriman M.
PLoS Negl. Trop. Dis. 6:E1455-E1455(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Puerto Rican.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE601630 Genomic DNA. Translation: CCD81057.1.
RefSeqXP_002573730.1. XM_002573684.1.
UniGeneSma.9950.

3D structure databases

ProteinModelPortalG4VN20.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaSmp_022960.1; Smp_022960.1:pep; Smp_022960.
GeneID8346066.
KEGGsmm:Smp_022960.

Organism-specific databases

CTD8346066.

Phylogenomic databases

KOK00128.
OMAMQDKIDQ.
PhylomeDBG4VN20.

Family and domain databases

Gene3D3.40.309.10. 1 hit.
3.40.605.10. 1 hit.
InterProIPR016161. Ald_DH/histidinol_DH.
IPR016163. Ald_DH_C.
IPR016160. Ald_DH_CS.
IPR016162. Ald_DH_N.
IPR015590. Aldehyde_DH_dom.
[Graphical view]
PfamPF00171. Aldedh. 1 hit.
[Graphical view]
SUPFAMSSF53720. SSF53720. 1 hit.
PROSITEPS00070. ALDEHYDE_DEHYDR_CYS. 1 hit.
PS00687. ALDEHYDE_DEHYDR_GLU. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG4VN20_SCHMA
AccessionPrimary (citable) accession number: G4VN20
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: November 13, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)