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G4VK98 (G4VK98_SCHMA) Unreviewed, UniProtKB/TrEMBL

Last modified September 5, 2012. Version 9. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
Putative histone-lysine n-methyltransferase, setb1 EMBL CCD80106.1
Gene names
ORF Names:Smp_043580 EMBL CCD80106.1
OrganismSchistosoma mansoni (Blood fluke) [Reference proteome]
Taxonomic identifier6183 [NCBI]
Taxonomic lineageEukaryota › Metazoa › Platyhelminthes › Trematoda › Digenea › Strigeidida › Schistosomatoidea › Schistosomatidae › Schistosoma

Protein attributes

Sequence length250 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Catalytic activity

S-adenosyl-L-methionine + L-lysine-[histone] = S-adenosyl-L-homocysteine + N(6)-methyl-L-lysine-[histone]. SAAS SAAS007728

S-adenosyl-L-methionine + histone L-lysine = S-adenosyl-L-homocysteine + histone N(6)-methyl-L-lysine. RuleBase RU004542

Subcellular location

Nucleus By similarity RuleBase RU004542.

Sequence similarities

Contains 1 SET domain. SAAS SAAS007728 RuleBase RU004538

Contains 1 pre-SET domain. SAAS SAAS007728 RuleBase RU004542

Sequences

Sequence LengthMass (Da)Tools
G4VK98 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: CF9927897FEA7EB3

FASTA25028,119
        10         20         30         40         50         60 
MELLYHEDIP IDLITEQLIG CTCENICCLE DNCTCLSKSG MSYDMNGLLT NFVDPVFECN 

        70         80         90        100        110        120 
SECVCSQSCT NRVVQKYLID AEFTFESEYH TKTCVTDHPV MGRGLKAACE IQRGELVCVY 

       130        140        150        160        170        180 
LGEVIPYKEA CLREALQLSC YGRNFIMVMR EYSDHRLISE TCVDGNSESW GSVKSKARLI 

       190        200        210        220        230        240 
NHSCTPNLTV VPVRVDSFIP YLALFANKVI FEGTQLSYDY AQSVPSDKIR LSNTLCLCNS 

       250 
DSCRVYMPGV

« Hide

References

[1]"A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni."
Protasio A.V., Tsai I.J., Babbage A., Nichol S., Hunt M., Aslett M.A., De Silva N., Velarde G.S., Anderson T.J., Clark R.C., Davidson C., Dillon G.P., Holroyd N.E., LoVerde P.T., Lloyd C., McQuillan J., Oliveira G., Otto T.D. expand/collapse author list , Parker-Manuel S.J., Quail M.A., Wilson R.A., Zerlotini A., Dunne D.W., Berriman M.
PLoS Negl. Trop. Dis. 6:E1455-E1455(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Puerto Rican.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		HE601628 Genomic DNA. Translation: CCD80106.1.
RefSeqXP_002575698.1. XM_002575652.1.
UniGeneSma.15399.

3D structure databases

ProteinModelPortalG4VK98.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID8350255.
KEGGsmm:Smp_043580.

Organism-specific databases

CTD8350255.

Phylogenomic databases

KOK11433.
OMAPYDSSLY.
PhylomeDBG4VK98.

Family and domain databases

InterProIPR007728. Pre-SET_dom.
IPR001214. SET_dom.
[Graphical view]
PfamPF05033. Pre-SET. 1 hit.
PF00856. SET. 1 hit.
[Graphical view]
SMARTSM00317. SET. 1 hit.
[Graphical view]
PROSITEPS50867. PRE_SET. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG4VK98_SCHMA
AccessionPrimary (citable) accession number: G4VK98
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: September 5, 2012
This is version 9 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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