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G4VFD7 (G4VFD7_SCHMA) Unreviewed, UniProtKB/TrEMBL

Last modified November 13, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=1.3.98.1 EMBL CCD78646.1
Gene names
ORF Names:Smp_078730 EMBL CCD78646.1
OrganismSchistosoma mansoni (Blood fluke) [Reference proteome] EMBL CCD78646.1
Taxonomic identifier6183 [NCBI]
Taxonomic lineageEukaryotaMetazoaPlatyhelminthesTrematodaDigeneaStrigeididaSchistosomatoideaSchistosomatidaeSchistosoma

Protein attributes

Sequence length379 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
G4VFD7 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: ECFD1BFB9BD01E4D

FASTA37941,289
        10         20         30         40         50         60 
MSRIRTSLEV LSLGFGLFTA EALYSGNEHF YKDWFLPTAR LLVRDGETAH NLSVYLASYG 

        70         80         90        100        110        120 
FIPHKQRNSF PQLKCKVFGL EFDHPIGLAA GFDKDGKAFM GLLNAGFSHI EVGTVTPNPQ 

       130        140        150        160        170        180 
LGNARPRIFR WTEKEAVVNR CGFNSDGHDA VYERLKDRPW EGRGVIGVNL GCNKTSADPT 

       190        200        210        220        230        240 
ADYVAGVRKF GEVADYLVIN VSSPNTPGLR SLQTKEKLRD LLSKVLAARN QLSKKTPILL 

       250        260        270        280        290        300 
KISPDENDQN LKDIVEVALD SKTRIDGMII SNTTLTTYEE AVACGAAPIP GNNKQNVVYG 

       310        320        330        340        350        360 
GLSGRPLFEK STDCLRKVSA LTKGAIPLIG VGGISCGEDA LSKLNAGASL VQLYTSFVYQ 

       370 
GPPVAHKVAR EINKLKMTS 

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References

[1]"A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni."
Protasio A.V., Tsai I.J., Babbage A., Nichol S., Hunt M., Aslett M.A., De Silva N., Velarde G.S., Anderson T.J., Clark R.C., Davidson C., Dillon G.P., Holroyd N.E., LoVerde P.T., Lloyd C., McQuillan J., Oliveira G., Otto T.D. expand/collapse author list , Parker-Manuel S.J., Quail M.A., Wilson R.A., Zerlotini A., Dunne D.W., Berriman M.
PLoS Negl. Trop. Dis. 6:E1455-E1455(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Puerto Rican.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE601626 Genomic DNA. Translation: CCD78646.1.
RefSeqXP_002579010.1. XM_002578964.1.
UniGeneSma.12547.

3D structure databases

ProteinModelPortalG4VFD7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaSmp_078730.1; Smp_078730.1:pep; Smp_078730.
GeneID8355274.
KEGGsmm:Smp_078730.

Organism-specific databases

CTD8355274.

Phylogenomic databases

KOK00254.
OMAVYEGPGL.
PhylomeDBG4VFD7.

Family and domain databases

Gene3D3.20.20.70. 1 hit.
InterProIPR013785. Aldolase_TIM.
IPR012135. Dihydroorotate_DH_1_2.
IPR005719. Dihydroorotate_DH_2.
IPR001295. Dihydroorotate_DH_CS.
[Graphical view]
PfamPF01180. DHO_dh. 1 hit.
[Graphical view]
PIRSFPIRSF000164. DHO_oxidase. 1 hit.
TIGRFAMsTIGR01036. pyrD_sub2. 1 hit.
PROSITEPS00911. DHODEHASE_1. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG4VFD7_SCHMA
AccessionPrimary (citable) accession number: G4VFD7
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: November 13, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)