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Protein
Submitted name:

FTZ-F1 nuclear receptor-like protein

Gene

Smp_068780

Organism
Schistosoma mansoni (Blood fluke)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi378 – 456Nuclear receptorPROSITE-ProRule annotationAdd BLAST79

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionDNA-bindingPROSITE-ProRule annotationSAAS annotation, ReceptorSAAS annotationImported
Biological processTranscription, Transcription regulationPROSITE-ProRule annotationSAAS annotation
LigandMetal-binding, Zinc

Names & Taxonomyi

Protein namesi
Submitted name:
FTZ-F1 nuclear receptor-like proteinImported
Gene namesi
ORF Names:Smp_068780Imported
OrganismiSchistosoma mansoni (Blood fluke)Imported
Taxonomic identifieri6183 [NCBI]
Taxonomic lineageiEukaryotaMetazoaPlatyhelminthesTrematodaDigeneaStrigeididaSchistosomatoideaSchistosomatidaeSchistosoma
Proteomesi
  • UP000008854 Componenti: Chromosome 2

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

Keywords - Cellular componenti

NucleusPROSITE-ProRule annotationSAAS annotation

Interactioni

Protein-protein interaction databases

STRINGi6183.Smp_068780__mRNA

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini378 – 456Nuclear receptorInterPro annotationAdd BLAST79
Domaini619 – 784NR LBDInterPro annotationAdd BLAST166

Sequence similaritiesi

Belongs to the nuclear hormone receptor family.SAAS annotation

Keywords - Domaini

Zinc-fingerPROSITE-ProRule annotationSAAS annotation

Phylogenomic databases

eggNOGiKOG4218 Eukaryota
ENOG410YWC2 LUCA
InParanoidiG4VCQ5
KOiK08705
OrthoDBiEOG091G069P

Family and domain databases

Gene3Di3.30.50.10, 1 hit
InterProiView protein in InterPro
IPR035500 NHR_like_dom_sf
IPR016355 NR5_fam
IPR000536 Nucl_hrmn_rcpt_lig-bd
IPR001723 Nuclear_hrmn_rcpt
IPR001628 Znf_hrmn_rcpt
IPR013088 Znf_NHR/GATA
PANTHERiPTHR24086 PTHR24086, 1 hit
PfamiView protein in Pfam
PF00104 Hormone_recep, 1 hit
PF00105 zf-C4, 1 hit
PRINTSiPR00398 STRDHORMONER
PR00047 STROIDFINGER
SMARTiView protein in SMART
SM00399 ZnF_C4, 1 hit
SUPFAMiSSF48508 SSF48508, 2 hits
PROSITEiView protein in PROSITE
PS51843 NR_LBD, 1 hit
PS00031 NUCLEAR_REC_DBD_1, 1 hit
PS51030 NUCLEAR_REC_DBD_2, 1 hit

Sequencei

Sequence statusi: Complete.

G4VCQ5-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAASEVTSPT NIQDDLKNES LEATVSLDKL IMGGAPKSSG SLSTSDDHVP
60 70 80 90 100
STTYVTIHLP DGTQGSTLSQ QKLQELIMHL SQSGQIQLRE DSKIVIDLKF
110 120 130 140 150
TGKSGDQGAQ TKLENSPLQH SAVSSCTASQ IQTIASSNPH RVLQVGSPGS
160 170 180 190 200
DGVQIVRTIP SFVSSTTQII SFPTVATQQP VAAQSSNPRQ QIQQQPTYIL
210 220 230 240 250
VPAAQLASGG ENQVFASTPI RAVTAGHTML RTSGIGINNN QTVNTSSVNL
260 270 280 290 300
SSADRSIILV QQPVAGTSIH VGSTGTIVPG SSSGSGTTLV PLRQLGVSTC
310 320 330 340 350
GGNGLVSSAG STRLIGSNIG IELFSNTGAV GSRSSQGQGG SMGLVTISAN
360 370 380 390 400
AGVSGSSSSG TPQRESTWQQ YVKQFTKLGP CPICGDKISG YHYGIFCCES
410 420 430 440 450
CKGFFKRTVQ NAKRYACHRP NASSRCEINV ASRKKCPACR FLKCVDKGMR
460 470 480 490 500
IEAIRSDRTR GGRSMYPGSR YLRQIAARVS GNRSTSGLAI SSSCMEFSTS
510 520 530 540 550
DLDGNMLGGL TDQSIMSDDA DQLSCSVVGL AAHTLGPDGL PASEDAGGGV
560 570 580 590 600
YLDPGVLGTH DNDEEEIDSG SLRVEPNILE CGSGIVGGTN LSTNVVSPYS
610 620 630 640 650
GRQVIIGGSN ESIPRTREQL PKIIRDILLV EETIEAEPED ALEIDSAVAS
660 670 680 690 700
ETAAPEGVSD DEAAVYRALL NLADQRLYRT VRWSRALPDF SLLDTDDQIL
710 720 730 740 750
LIQNCWADLL CLDCCWRSLP TPSEIRLTSS KCINLEAARE MGAEEIVERI
760 770 780
LQLTQSLTRL QLDSDLYACL KVIVLMQAGE FSMT
Length:784
Mass (Da):82,978
Last modified:December 14, 2011 - v1
Checksum:i1631121E39C9D7E2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
HE601625 Genomic DNA Translation: CCD77680.1
RefSeqiXP_018650302.1, XM_018796051.1

Genome annotation databases

EnsemblMetazoaiSmp_068780.1; Smp_068780.1:pep; Smp_068780
GeneDBiSmp_068780.1:pep
GeneIDi8354267
KEGGismm:Smp_068780

Similar proteinsi

Entry informationi

Entry nameiG4VCQ5_SCHMA
AccessioniPrimary (citable) accession number: G4VCQ5
Entry historyiIntegrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: May 23, 2018
This is version 47 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

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