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G4V5N4 (G4V5N4_SCHMA) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
ORF Names:Smp_055310 EMBL CCD76627.1
OrganismSchistosoma mansoni (Blood fluke) [Reference proteome]
Taxonomic identifier6183 [NCBI]
Taxonomic lineageEukaryotaMetazoaPlatyhelminthesTrematodaDigeneaStrigeididaSchistosomatoideaSchistosomatidaeSchistosoma

Protein attributes

Sequence length409 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Sequence similarities

Contains 1 SET domain. RuleBase RU004538

Contains SET domain. SAAS SAAS001214

Ontologies

Sequences

Sequence LengthMass (Da)Tools
G4V5N4 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: 17662DB15B3678C7

FASTA40946,039
        10         20         30         40         50         60 
MTSVKVSSHS YTLKWEDSSS IENSYSKKHC LHSCNSSSPS LRQTQLNFSP NHQTKLSKQF 

        70         80         90        100        110        120 
ENVVDVIKPN NTNWSTNEKD SLKSNEHNSY PQTSIKPEPL SVLLTESSNK SPESIITSPT 

       130        140        150        160        170        180 
RIMKQAILTE TGISPGGNVC KKPIRKKKAA TNKKSQVKRS RSVDSPQINT ITKNDIDGND 

       190        200        210        220        230        240 
SVTLSTSNTR QTGTTTTTTR VCKSTSVSPK KNSHVASDLC TATRNKQNKS KTQLQTQLTS 

       250        260        270        280        290        300 
YGIRKTARQY AKEIEREREN NFLNALKNNI ETGMKIIQTE EKGRGIIATR TFYEGEFVVE 

       310        320        330        340        350        360 
YAGDLISEKL AKQREAVYKQ NPEIGSYMFF FVHAGQRYCV DATKETPRLG RLINHSRLKP 

       370        380        390        400 
NCIVKVIPID GIPRLALFAR KSISPGEELL YDYGDRDKET LQLHPWLKT 

« Hide

References

[1]"A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni."
Protasio A.V., Tsai I.J., Babbage A., Nichol S., Hunt M., Aslett M.A., De Silva N., Velarde G.S., Anderson T.J., Clark R.C., Davidson C., Dillon G.P., Holroyd N.E., LoVerde P.T., Lloyd C., McQuillan J., Oliveira G., Otto T.D. expand/collapse author list , Parker-Manuel S.J., Quail M.A., Wilson R.A., Zerlotini A., Dunne D.W., Berriman M.
PLoS Negl. Trop. Dis. 6:E1455-E1455(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Puerto Rican.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
HE601624 Genomic DNA. Translation: CCD76627.1.
RefSeqXP_002576803.1. XM_002576757.1.
UniGeneSma.12981.

3D structure databases

ProteinModelPortalG4V5N4.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaSmp_055310.1; Smp_055310.1:pep; Smp_055310.
GeneID8354950.
KEGGsmm:Smp_055310.

Organism-specific databases

CTD8354950.

Phylogenomic databases

KOK11428.
OMARERENNF.
PhylomeDBG4V5N4.

Family and domain databases

InterProIPR016858. Hist_H4-K20_MeTrfase.
IPR001214. SET_dom.
[Graphical view]
PfamPF00856. SET. 1 hit.
[Graphical view]
PIRSFPIRSF027717. Histone_H4-K20_mtfrase. 1 hit.
SMARTSM00317. SET. 1 hit.
[Graphical view]
PROSITEPS51571. SAM_MT43_PR_SET. 1 hit.
PS50280. SET. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG4V5N4_SCHMA
AccessionPrimary (citable) accession number: G4V5N4
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: April 16, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)