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G4SZS2 (G4SZS2_META2) Unreviewed, UniProtKB/TrEMBL

Last modified June 11, 2014. Version 20. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length283 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL CCE25522.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G4SZS2 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: 2E17E6B7E0EDFA3A

FASTA28332,358
        10         20         30         40         50         60 
MNKANRFNLV RLLLIPIFLF VASAAAIEKP DIMQAKVFDP SIDVTEYWVS EKLDGVRARW 

        70         80         90        100        110        120 
DGKQLISKNG HLLHAPNWFI EDFPDVTLDG ELWLARGQYQ QTVSIVSRKA PHSGWEKIKL 

       130        140        150        160        170        180 
MVFDLPDNPK PFSERVAAMR QMAQQRHTPY LNFIKQFRVV SPDELKQKLD QVVAEGGEGL 

       190        200        210        220        230        240 
MLHHQDSLYQ HGRSNRLLKL KPYDDAEAVV IGYRPGKGQF AGKMGSLKVR TENGKEFYIG 

       250        260        270        280 
TGFSQREREA PPPLGSLISF RHQGYTDKGI PRFAVFIRIR DEP 

« Hide

References

[1]"Genome sequence of the haloalkaliphilic methanotrophic bacterium Methylomicrobium alcaliphilum 20Z."
Vuilleumier S., Khmelenina V.N., Bringel F., Reshetnikov A.S., Lajus A., Mangenot S., Rouy Z., Op den Camp H.J., Jetten M.S., Dispirito A.A., Dunfield P., Klotz M.G., Semrau J.D., Stein L.Y., Barbe V., Medigue C., Trotsenko Y.A., Kalyuzhnaya M.G.
J. Bacteriol. 194:551-552(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
FO082060 Genomic DNA. Translation: CCE25522.1.
RefSeqYP_004919105.1. NC_016112.1.

3D structure databases

ProteinModelPortalG4SZS2.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID11363750.
KEGGmah:MEALZ_3867.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMSSF50249. SSF50249. 1 hit.
PROSITEPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG4SZS2_META2
AccessionPrimary (citable) accession number: G4SZS2
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: June 11, 2014
This is version 20 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)