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G4SZS2

- G4SZS2_META2

UniProt

G4SZS2 - G4SZS2_META2

Protein
Submitted name:

DNA ligase

Gene

ligA

Organism
Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 21 (01 Oct 2014)
      Sequence version 1 (14 Dec 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ligAImported
    Ordered Locus Names:MEALZ_3867Imported
    OrganismiMethylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z)Imported
    Taxonomic identifieri1091494 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaMethylococcalesMethylococcaceaeMethylomicrobium
    ProteomesiUP000008315: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG4SZS2.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G4SZS2-1 [UniParc]FASTAAdd to Basket

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    MNKANRFNLV RLLLIPIFLF VASAAAIEKP DIMQAKVFDP SIDVTEYWVS    50
    EKLDGVRARW DGKQLISKNG HLLHAPNWFI EDFPDVTLDG ELWLARGQYQ 100
    QTVSIVSRKA PHSGWEKIKL MVFDLPDNPK PFSERVAAMR QMAQQRHTPY 150
    LNFIKQFRVV SPDELKQKLD QVVAEGGEGL MLHHQDSLYQ HGRSNRLLKL 200
    KPYDDAEAVV IGYRPGKGQF AGKMGSLKVR TENGKEFYIG TGFSQREREA 250
    PPPLGSLISF RHQGYTDKGI PRFAVFIRIR DEP 283
    Length:283
    Mass (Da):32,358
    Last modified:December 14, 2011 - v1
    Checksum:i2E17E6B7E0EDFA3A
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO082060 Genomic DNA. Translation: CCE25522.1.
    RefSeqiYP_004919105.1. NC_016112.1.

    Genome annotation databases

    GeneIDi11363750.
    KEGGimah:MEALZ_3867.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    FO082060 Genomic DNA. Translation: CCE25522.1 .
    RefSeqi YP_004919105.1. NC_016112.1.

    3D structure databases

    ProteinModelPortali G4SZS2.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    GeneIDi 11363750.
    KEGGi mah:MEALZ_3867.

    Phylogenomic databases

    KOi K01971.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 19304 / NCIMB 14124 / VKM B-2133 / 20ZImported.

    Entry informationi

    Entry nameiG4SZS2_META2
    AccessioniPrimary (citable) accession number: G4SZS2
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 14, 2011
    Last sequence update: December 14, 2011
    Last modified: October 1, 2014
    This is version 21 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3