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G4SWW9 (G4SWW9_META2) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
ATP synthase subunit beta HAMAP-Rule MF_01347
EC=3.6.3.14 HAMAP-Rule MF_01347
Alternative name(s):
ATP synthase F1 sector subunit beta HAMAP-Rule MF_01347
F-ATPase subunit beta HAMAP-Rule MF_01347
Gene names
Name:atpD HAMAP-Rule MF_01347 EMBL CCE22035.1
Ordered Locus Names:MEALZ_0335 EMBL CCE22035.1
OrganismMethylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) [Complete proteome] [HAMAP]
Taxonomic identifier1091494 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Methylococcales › Methylococcaceae › Methylomicrobium ›

Protein attributes

Sequence length460 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits By similarity. HAMAP-Rule MF_01347

Catalytic activity

ATP + H2O + H+(In) = ADP + phosphate + H+(Out). HAMAP-Rule MF_01347

Subunit structure

F-type ATPases have 2 components, CF1 - the catalytic core - and CF0 - the membrane proton channel. CF1 has five subunits: alpha3, beta3, gamma1, delta1, epsilon1. CF0 has four main subunits: a1, b1, b'1 and c(9-12) By similarity. HAMAP-Rule MF_01347

Subcellular location

Cell inner membrane; Peripheral membrane protein By similarity HAMAP-Rule MF_01347.

Sequence similarities

Belongs to the ATPase alpha/beta chains family. HAMAP-Rule MF_01347

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Nucleotide binding148 – 1558ATP By similarity HAMAP-Rule MF_01347

Sequences

Sequence LengthMass (Da)Tools
G4SWW9 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: A308E41F21F7F2CC

FASTA46050,157
        10         20         30         40         50         60 
MSLGKIVQII GAVVDVEFPR ESLPKVYDAL KVEDKNLVLE VQQQLGDGVV RSIAMGSTDG 

        70         80         90        100        110        120 
LSRGLQVSNS GAPIAVPVGQ KTLGRIMNVL GEPIDEKGAI GEDERWAIHR EAPSYDEQAA 

       130        140        150        160        170        180 
SNELLETGIK VIDLVCPFAK GGKVGLFGGA GVGKTVNMME LIRNIAIEHS GFSVFAGVGE 

       190        200        210        220        230        240 
RTREGNDFYH EMTDSKVIDK VSLVYGQMNE PPGNRLRVAL TGLTMAEFFR EEGRDVLFFV 

       250        260        270        280        290        300 
DNIYRYTLAG TEVSALLGRM PSAVGYQPNL AEEMGVLQER ITSTKTGSIT SIQAVYVPAD 

       310        320        330        340        350        360 
DLTDPSPATT FAHLDATVVL SRQIAELGIY PAIDPLDSTS RQLDPLVIGH EHYNVARAVQ 

       370        380        390        400        410        420 
GTLQRYKELR DIIAILGMDE LSEEDKLIVS RARKIQRFLS QPFFVAEVFT GSPGKYVSLK 

       430        440        450        460 
DTIAGFKGII DGEYDHVPEQ AFYMVGTIDE ALEKAKGMKK

« Hide

References

[1]"Genome sequence of the haloalkaliphilic methanotrophic bacterium Methylomicrobium alcaliphilum 20Z."
Vuilleumier S., Khmelenina V.N., Bringel F., Reshetnikov A.S., Lajus A., Mangenot S., Rouy Z., Op den Camp H.J., Jetten M.S., Dispirito A.A., Dunfield P., Klotz M.G., Semrau J.D., Stein L.Y., Barbe V., Medigue C., Trotsenko Y.A., Kalyuzhnaya M.G.
J. Bacteriol. 194:551-552(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		FO082060 Genomic DNA. Translation: CCE22035.1.
RefSeqYP_004915634.1. NC_016112.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

GeneID11361735.
KEGGmah:MEALZ_0335.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK02112.

Enzyme and pathway databases

BioCycMALC271065:GJFB-339-MONOMER.

Family and domain databases

Gene3D1.10.1140.10. 1 hit.
HAMAPMF_01347. ATP_synth_beta_bact.
InterProIPR003593. AAA+_ATPase.
IPR020003. ATPase_a/bsu_AS.
IPR004100. ATPase_a/bsu_N.
IPR005722. ATPase_F1-cplx_bsu.
IPR000793. ATPase_F1/V1/A1-cplx_a/bsu_C.
IPR000194. ATPase_F1/V1/A1_a/bsu_nucl-bd.
IPR024034. ATPase_F1_bsu/V1_C.
[Graphical view]
PANTHERPTHR15184:SF8. PTHR15184:SF8. 1 hit.
PfamPF00006. ATP-synt_ab. 1 hit.
PF00306. ATP-synt_ab_C. 1 hit.
PF02874. ATP-synt_ab_N. 1 hit.
[Graphical view]
SMARTSM00382. AAA. 1 hit.
[Graphical view]
SUPFAMSSF47917. ATPase_a/b_C. 1 hit.
SSF50615. ATPase_a/b_N. 1 hit.
TIGRFAMsTIGR01039. atpD. 1 hit.
PROSITEPS00152. ATPASE_ALPHA_BETA. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG4SWW9_META2
AccessionPrimary (citable) accession number: G4SWW9
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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