G4SVQ7 (G4SVQ7_META2) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
Alanine racemase RuleBase RU000608
EC=5.1.1.1 RuleBase RU000608

Gene names

Ordered Locus Names:

MEALZ_2436 EMBL CCE24116.1

Organism

Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) [Complete proteome] [HAMAP]

Taxonomic identifier

1091494 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Methylococcales › Methylococcaceae › Methylomicrobium › Methylomicrobium alcaliphilum

Protein attributes

Sequence length	358 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Catalytic activity	L-alanine = D-alanine. SAAS SAAS020622 RuleBase RU000608
Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000608 SAAS SAAS020622
Pathway	Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. SAAS SAAS020622
Sequence similarities	Belongs to the alanine racemase family. RuleBase RU004188

Ontologies

Keywords
Ligand	Pyridoxal phosphate SAAS SAAS020622 RuleBase RU000608
Molecular function	Isomerase SAAS SAAS020622 RuleBase RU000608 EMBL CCE24116.1
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	D-alanine biosynthetic process Inferred from electronic annotation. Source: UniProtKB-UniPathway
Molecular_function	alanine racemase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G4SVQ7 [UniParc]. Last modified December 14, 2011. Version 1. Checksum: C44DD8EEFE9407AD	FASTA	358	39,057
	10 20 30 40 50 60 MTPAAYVKLN LDALRHNLHV VRRYAPDSKV MAVIKANAYG HGLLRVAERL TEADGFAVAR 70 80 90 100 110 120 VDEGIRLRQA GISHRIAVME GFTCSEELND LIDFGLDPLI HSFGQLDIID RKFGSIGINA 130 140 150 160 170 180 WLKIDTGMNR LGFSADEVEK VHQRLRSSSL IKQPVGFITH LANADLRSDP MTLKQIDLFN 190 200 210 220 230 240 RTLSGFAGPR SIANSAGILG WREALTDWVR PGIMLYGISP FPETTGGDFD LKPVMALHSR 250 260 270 280 290 300 LIAVKSVRQG DTVGYGATWA CDRPITMGVV AIGYGDGYPR HARSGTPVLV NGRRVPMIGR 310 320 330 340 350 VSMDMITVDL SGQNDAKPGD PVTLWGGALP IEEVASWSGT IPYTLVCGIT QRVQIVEE

References

[1]

"Genome sequence of the haloalkaliphilic methanotrophic bacterium Methylomicrobium alcaliphilum 20Z." Vuilleumier S., Khmelenina V.N., Bringel F., Reshetnikov A.S., Lajus A., Mangenot S., Rouy Z., Op den Camp H.J., Jetten M.S., Dispirito A.A., Dunfield P., Klotz M.G., Semrau J.D., Stein L.Y., Barbe V., Medigue C., Trotsenko Y.A., Kalyuzhnaya M.G. J. Bacteriol. 194:551-552(2012) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FO082060 Genomic DNA. Translation: CCE24116.1.
RefSeq	YP_004917704.1. NC_016112.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
GeneID	11360479.
KEGG	mah:MEALZ_2436.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01775.
Enzyme and pathway databases
BioCyc	MALC271065:GJFB-2453-MONOMER.
UniPathway	UPA00042; UER00497.
Family and domain databases
Gene3D	2.40.37.10. 1 hit.
HAMAP	MF_01201. Ala_racemase.
InterPro	IPR000821. Ala_racemase. IPR009006. Ala_racemase/Decarboxylase_C. IPR011079. Ala_racemase_C. IPR001608. Ala_racemase_N. IPR020622. Ala_racemase_pyridoxalP-BS. [Graphical view]
Pfam	PF00842. Ala_racemase_C. 1 hit. PF01168. Ala_racemase_N. 1 hit. [Graphical view]
PRINTS	PR00992. ALARACEMASE.
SMART	SM01005. Ala_racemase_C. 1 hit. [Graphical view]
SUPFAM	SSF50621. Racem_decarbox_C. 1 hit.
TIGRFAMs	TIGR00492. alr. 1 hit.
PROSITE	PS00395. ALANINE_RACEMASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G4SVQ7_META2

Accession

Primary (citable) accession number: G4SVQ7

Entry history

Integrated into UniProtKB/TrEMBL:	December 14, 2011
Last sequence update:	December 14, 2011
Last modified:	March 6, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)