G4RL88 (G4RL88_THETK) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Recommended name:
DNA-directed RNA polymerase subunit K HAMAP-Rule MF_00192
EC=2.7.7.6 HAMAP-Rule MF_00192

Gene names

Name:	rpoK HAMAP-Rule MF_00192 EMBL CCC82333.1
Ordered Locus Names:	TTX_1712 EMBL CCC82333.1

Organism

Thermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra 1) [Complete proteome] [HAMAP]

Taxonomic identifier

768679 [NCBI]

Taxonomic lineage

cellular organisms › Archaea › Crenarchaeota › Thermoprotei › Thermoproteales › Thermoproteaceae › Thermoproteus › Thermoproteus tenax

Protein attributes

Sequence length	112 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Function	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates By similarity. HAMAP-Rule MF_00192
Catalytic activity	Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). HAMAP-Rule MF_00192
Sequence similarities	Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. HAMAP-Rule MF_00192

Ontologies

Keywords
Biological process	Transcription
Cellular component	DNA-directed RNA polymerase HAMAP-Rule MF_00192 EMBL CCC82333.1
Molecular function	Nucleotidyltransferase HAMAP-Rule MF_00192 EMBL CCC82333.1 Transferase
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	transcription, DNA-dependent Inferred from electronic annotation. Source: HAMAP
Cellular_component	RNA polymerase complex Inferred from electronic annotation. Source: InterPro
Molecular_function	DNA binding Inferred from electronic annotation. Source: HAMAP DNA-directed RNA polymerase activity Inferred from electronic annotation. Source: HAMAP
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G4RL88 [UniParc]. Last modified December 14, 2011. Version 1. Checksum: 3AFDFA630F80B75B	FASTA	112	12,797
	10 20 30 40 50 60 METRLSTPEL VERIEKLVQA LRSSLQDRTL YPPRLTRFEV ARVIAARAIQ LSMGAEPLID 70 80 90 100 110 ISTLQIKDPV IIAIEEFKQG KLNFSIVREL PDGKTIKLQL KNLLEFEKLI QA

References

[1]

"The complete genome sequence of Thermoproteus tenax: a physiologically versatile member of the Crenarchaeota." Siebers B., Zaparty M., Raddatz G., Tjaden B., Albers S.V., Bell S.D., Blombach F., Kletzin A., Kyrpides N., Lanz C., Plagens A., Rampp M., Rosinus A., von Jan M., Makarova K.S., Klenk H.P., Schuster S.C., Hensel R. PLoS ONE 6:E24222-E24222(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: ATCC 35583 / NBRC 100435 / JCM 9277 / Kra 1.

Cross-references

Sequence databases
EMBL GenBank DDBJ	FN869859 Genomic DNA. Translation: CCC82333.1.
RefSeq	YP_004893411.1. NC_016070.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	CCC82333; CCC82333; TTX_1712.
GeneID	11262592.
KEGG	ttn:TTX_1712.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K03055.
Family and domain databases
Gene3D	3.90.940.10. 1 hit.
HAMAP	MF_00192. RNApol_arch_K.
InterPro	IPR020708. DNA-dir_RNA_polK_14-18kDa_CS. IPR006110. RNA_poly_omega/K/RPABC2. IPR006111. RNAP_K/Rpb6. IPR012293. RNAP_RPB6_omega. [Graphical view]
PANTHER	PTHR10773. PTHR10773. 1 hit.
Pfam	PF01192. RNA_pol_Rpb6. 1 hit. [Graphical view]
PIRSF	PIRSF000778. RpoK/RPB6. 1 hit.
SUPFAM	SSF63562. RNA_pol_omega. 1 hit.
PROSITE	PS01111. RNA_POL_K_14KD. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

G4RL88_THETK

Accession

Primary (citable) accession number: G4RL88

Entry history

Integrated into UniProtKB/TrEMBL:	December 14, 2011
Last sequence update:	December 14, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)