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Protein

DNA-directed RNA polymerase subunit H

Gene

rpoH

Organism
Thermoproteus tenax (strain ATCC 35583 / DSM 2078 / JCM 9277 / NBRC 100435 / Kra 1)
Status
Unreviewed-Annotation score: -Protein inferred from homologyi

Functioni

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.UniRule annotation

Catalytic activityi

Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).UniRule annotation

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionNucleotidyltransferaseUniRule annotationImported, Transferase
Biological processTranscription

Names & Taxonomyi

Protein namesi
Recommended name:
DNA-directed RNA polymerase subunit HUniRule annotation (EC:2.7.7.6UniRule annotation)
Gene namesi
Name:rpoHUniRule annotationImported
Ordered Locus Names:TTX_1679Imported
OrganismiThermoproteus tenax (strain ATCC 35583 / DSM 2078 / JCM 9277 / NBRC 100435 / Kra 1)Imported
Taxonomic identifieri768679 [NCBI]
Taxonomic lineageiArchaeaCrenarchaeotaThermoproteiThermoprotealesThermoproteaceaeThermoproteus
Proteomesi
  • UP000002654 Componenti: Chromosome

Subcellular locationi

Keywords - Cellular componenti

DNA-directed RNA polymeraseUniRule annotationSAAS annotationImported

Interactioni

Protein-protein interaction databases

STRINGi768679.TTX_1679.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini25 – 96RNA_pol_Rpb5_CInterPro annotationAdd BLAST72

Sequence similaritiesi

Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family.UniRule annotation

Phylogenomic databases

eggNOGiarCOG04258. Archaea.
COG2012. LUCA.
KOiK03053.
OMAiQIPWIRS.

Family and domain databases

Gene3Di3.90.940.20. 1 hit.
HAMAPiMF_00025. RNApol_RpoH_RPB5. 1 hit.
InterProiView protein in InterPro
IPR000783. RNA_pol_subH/Rpb5_C.
IPR035913. RPB5-like.
IPR020609. RpoH/RPB5.
PfamiView protein in Pfam
PF01191. RNA_pol_Rpb5_C. 1 hit.
ProDomiView protein in ProDom or Entries sharing at least one domain
PD005155. RNA_pol_subH/Rpb5_C. 1 hit.
SUPFAMiSSF55287. SSF55287. 1 hit.

Sequencei

Sequence statusi: Complete.

G4RL55-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLSGPSNVES RHKKWFLHTP VSKRVLEHSL GPQEVVVLTK EEARALLRKL
60 70 80 90
RVRPWQIPWI RSSDPLVKAV GAKPGDVIKI VRRSETAGES VIYRLVVPG
Length:99
Mass (Da):11,168
Last modified:December 14, 2011 - v1
Checksum:i4BDDB87EADE3134B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
FN869859 Genomic DNA. Translation: CCC82300.1.

Genome annotation databases

EnsemblBacteriaiCCC82300; CCC82300; TTX_1679.
KEGGittn:TTX_1679.
PATRICifig|768679.9.peg.1699.

Similar proteinsi

Entry informationi

Entry nameiG4RL55_THETK
AccessioniPrimary (citable) accession number: G4RL55
Entry historyiIntegrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: October 25, 2017
This is version 36 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported