KKY_3148

Functionⁱ

GO - Molecular functionⁱ

ATP binding Source: InterPro
DNA binding Source: InterPro
DNA ligase (ATP) activity Source: InterPro

Complete GO annotation...

GO - Biological processⁱ

DNA ligation involved in DNA repair Source: InterPro
DNA recombination Source: InterPro

Complete GO annotation...

Keywordsⁱ

Molecular function	LigaseImported

Molecular function

LigaseImported

Enzyme and pathway databases

BioCycⁱ	PHAL1082931:GJXT-3137-MONOMER.

BioCycⁱ

PHAL1082931:GJXT-3137-MONOMER.

Names & Taxonomyⁱ

Protein namesⁱ	Submitted name: ATP-dependent DNA ligase LigCImported
Gene namesⁱ	Ordered Locus Names:KKY_3148Imported
Organismⁱ	Pelagibacterium halotolerans (strain DSM 22347 / JCM 15775 / CGMCC 1.7692 / B2)Imported
Taxonomic identifierⁱ	1082931 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Hyphomicrobiaceae › Pelagibacterium › Pelagibacterium halotolerans
Proteomesⁱ	UP000008850 Componentⁱ: Chromosome

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	1082931.KKY_3148.

STRINGⁱ

1082931.KKY_3148.

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	G4RGY5.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	310 – 430	DNA_LIGASE_A3InterPro annotationAdd BLAST		121

Phylogenomic databases

eggNOGⁱ	ENOG4107QIM. Bacteria. COG1793. LUCA.
KEGG Orthology (KO) More...KOⁱ	K10747.
OMAⁱ	WLFEESY.
Database of Orthologous Groups More...OrthoDBⁱ	POG091H09SJ.

Family and domain databases

Gene3Dⁱ	1.10.3260.10. 1 hit.
InterProⁱ	View protein in InterPro IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit.
SUPFAMⁱ	SSF117018. SSF117018. 1 hit. SSF50249. SSF50249. 1 hit.
TIGRFAMsⁱ	TIGR04120. DNA_lig_bact. 1 hit.
PROSITEⁱ	View protein in PROSITE PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

G4RGY5-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MKRFATLLET LALTPSRNRK IEALAAYFRD TPDPDRGYAL AVLTGALSFT 
        60         70         80         90        100
HVKPARLKEV VLAEVDPHLF ALSYDYIGDL GETIALIWPH KGGTRQLPSL 
       110        120        130        140        150
SELVELLNTT PKSELALLIA ELLTSAQINE RWALVKLATG GLRIGVSERL 
       160        170        180        190        200
AKTALAEMSG TDLKDIEEIW HGIKMPYGDL FAWLEGRKPK PEIDHTARFH 
       210        220        230        240        250
PLMLSNPIDE EKDFSNLDPA DFVAEWKWDG IRVQLILGEG PASLFSRTGE 
       260        270        280        290        300
DIAPAFPDLV ENVFGHGVLD GELLVGNDFE PAPFNALQQR LNRKSATEKL 
       310        320        330        340        350
IGEHPAFVRV YDMLFDGDED IRALPWIDRR ARLQSFFADQ TQSRLDLSQL 
       360        370        380        390        400
LPFSDWDQLG TIRRQGADEN GHEGVMIKLK SAPYVPGRPK GNWFKWKRDP 
       410        420        430        440        450
NLLDAVLMYA QRGHGKRSSF YSDFTFGAWR GNELVPIGKA YFGFTDAELK 
       460        470        480        490        500
ELDKWVRAHT IASFGPVREV EKSLVFEVAF DSAQASTRHK SGVALRFPRI 
       510        520 
NRIRWDKPAA EAAHVGEVEA LIPAT

Length:525

Mass (Da):58,874

Last modified:December 14, 2011 - v1

Checksum:ⁱ7615EC7D845C0F47

GO

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP003075 Genomic DNA. Translation: AEQ53138.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_014132284.1. NC_016078.1.

Genome annotation databases

EnsemblBacteriaⁱ	AEQ53138; AEQ53138; KKY_3148.
KEGGⁱ	phl:KKY_3148.
PATRICⁱ	fig\|1082931.4.peg.3102.

Similar proteinsⁱ

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:

100%	UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%	UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%	UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	CP003075 Genomic DNA. Translation: AEQ53138.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_014132284.1. NC_016078.1.

3D structure databases

ProteinModelPortalⁱ	G4RGY5.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	1082931.KKY_3148.

STRINGⁱ

1082931.KKY_3148.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	AEQ53138; AEQ53138; KKY_3148.
KEGGⁱ	phl:KKY_3148.
PATRICⁱ	fig\|1082931.4.peg.3102.

Phylogenomic databases

eggNOGⁱ	ENOG4107QIM. Bacteria. COG1793. LUCA.
KEGG Orthology (KO) More...KOⁱ	K10747.
OMAⁱ	WLFEESY.
Database of Orthologous Groups More...OrthoDBⁱ	POG091H09SJ.

Enzyme and pathway databases

BioCycⁱ	PHAL1082931:GJXT-3137-MONOMER.

BioCycⁱ

PHAL1082931:GJXT-3137-MONOMER.

Family and domain databases

Gene3Dⁱ	1.10.3260.10. 1 hit.
InterProⁱ	View protein in InterPro IPR026333. ATP_dep_DNA_lig_pp_1105_fam. IPR012309. DNA_ligase_ATP-dep_C. IPR012310. DNA_ligase_ATP-dep_cent. IPR016059. DNA_ligase_ATP-dep_CS. IPR012308. DNA_ligase_ATP-dep_N. IPR012340. NA-bd_OB-fold.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF04679. DNA_ligase_A_C. 1 hit. PF01068. DNA_ligase_A_M. 1 hit. PF04675. DNA_ligase_A_N. 1 hit.
SUPFAMⁱ	SSF117018. SSF117018. 1 hit. SSF50249. SSF50249. 1 hit.
TIGRFAMsⁱ	TIGR04120. DNA_lig_bact. 1 hit.
PROSITEⁱ	View protein in PROSITE PS00697. DNA_LIGASE_A1. 1 hit. PS50160. DNA_LIGASE_A3. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	G4RGY5_PELHB
Accessionⁱ	G4RGY5Primary (citable) accession number: G4RGY5
Entry historyⁱ	Integrated into UniProtKB/TrEMBL:	December 14, 2011
	Last sequence update:	December 14, 2011
	Last modified:	June 7, 2017
	This is version 36 of the entry and version 1 of the sequence. See complete history.
Entry statusⁱ	Unreviewed (UniProtKB/TrEMBL)

Miscellaneousⁱ

Keywords - Technical termⁱ

Complete proteome, Reference proteomeImported

UniProtKB - G4RGY5 (G4RGY5_PELHB)

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ATP-dependent DNA ligase LigC

Select a section on the left to see content.

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Keywordsⁱ

Enzyme and pathway databases

Names & Taxonomyⁱ

Interactionⁱ

Protein-protein interaction databases

Structureⁱ

3D structure databases

Family & Domainsⁱ

Domains and Repeats

Phylogenomic databases

Family and domain databases

Sequenceⁱ

Sequence databases

Genome annotation databases

Similar proteinsⁱ

Cross-referencesⁱ

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

Entry informationⁱ

Miscellaneousⁱ

Keywords - Technical termⁱ

UniProtKB

UniParc

Help

UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - G4RGY5 (G4RGY5_PELHB)

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ATP-dependent DNA ligase LigC

KKY_3148

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Enzyme and pathway databases

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

Phylogenomic databases

Family and domain databases

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Functionⁱ

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ