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G4RGY5 (G4RGY5_PELHB) Unreviewed, UniProtKB/TrEMBL

Last modified May 14, 2014. Version 17. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Ordered Locus Names:KKY_3148 EMBL AEQ53138.1
OrganismPelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) [Complete proteome] [HAMAP] EMBL AEQ53138.1
Taxonomic identifier1082931 [NCBI]
Taxonomic lineageBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaePelagibacterium

Protein attributes

Sequence length525 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
G4RGY5 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: 7615EC7D845C0F47

FASTA52558,874
        10         20         30         40         50         60 
MKRFATLLET LALTPSRNRK IEALAAYFRD TPDPDRGYAL AVLTGALSFT HVKPARLKEV 

        70         80         90        100        110        120 
VLAEVDPHLF ALSYDYIGDL GETIALIWPH KGGTRQLPSL SELVELLNTT PKSELALLIA 

       130        140        150        160        170        180 
ELLTSAQINE RWALVKLATG GLRIGVSERL AKTALAEMSG TDLKDIEEIW HGIKMPYGDL 

       190        200        210        220        230        240 
FAWLEGRKPK PEIDHTARFH PLMLSNPIDE EKDFSNLDPA DFVAEWKWDG IRVQLILGEG 

       250        260        270        280        290        300 
PASLFSRTGE DIAPAFPDLV ENVFGHGVLD GELLVGNDFE PAPFNALQQR LNRKSATEKL 

       310        320        330        340        350        360 
IGEHPAFVRV YDMLFDGDED IRALPWIDRR ARLQSFFADQ TQSRLDLSQL LPFSDWDQLG 

       370        380        390        400        410        420 
TIRRQGADEN GHEGVMIKLK SAPYVPGRPK GNWFKWKRDP NLLDAVLMYA QRGHGKRSSF 

       430        440        450        460        470        480 
YSDFTFGAWR GNELVPIGKA YFGFTDAELK ELDKWVRAHT IASFGPVREV EKSLVFEVAF 

       490        500        510        520 
DSAQASTRHK SGVALRFPRI NRIRWDKPAA EAAHVGEVEA LIPAT 

« Hide

References

[1]"Complete Genome Sequence of Pelagibacterium halotolerans B2T."
Huo Y.Y., Cheng H., Han X.F., Jiang X.W., Sun C., Zhang X.Q., Zhu X.F., Liu Y.F., Li P.F., Ni P.X., Wu M.
J. Bacteriol. 194:197-198(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 15775 / CGMCC 1.7692 / B2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003075 Genomic DNA. Translation: AEQ53138.1.
RefSeqYP_004900888.1. NC_016078.1.

3D structure databases

ProteinModelPortalG4RGY5.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEQ53138; AEQ53138; KKY_3148.
GeneID11342164.
KEGGphl:KKY_3148.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.
OMANRHKSGV.

Enzyme and pathway databases

BioCycPHAL1082931:GJXT-3141-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR026333. ATP_dep_DNA_lig_pp_1105_fam.
IPR012309. DNA_ligase_ATP-dep_C.
IPR012310. DNA_ligase_ATP-dep_cent.
IPR016059. DNA_ligase_ATP-dep_CS.
IPR012308. DNA_ligase_ATP-dep_N.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF04679. DNA_ligase_A_C. 1 hit.
PF01068. DNA_ligase_A_M. 1 hit.
PF04675. DNA_ligase_A_N. 1 hit.
[Graphical view]
SUPFAMSSF117018. SSF117018. 1 hit.
SSF50249. SSF50249. 1 hit.
TIGRFAMsTIGR04120. DNA_lig_bact. 1 hit.
PROSITEPS00697. DNA_LIGASE_A1. 1 hit.
PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG4RGY5_PELHB
AccessionPrimary (citable) accession number: G4RGY5
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: May 14, 2014
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)