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G4RFZ7 (G4RFZ7_PELHB) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 23. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Protein attributes

Sequence length377 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity. HAMAP-Rule MF_01201

Catalytic activity

L-alanine = D-alanine. HAMAP-Rule MF_01201

Cofactor

Pyridoxal phosphate By similarity. HAMAP-Rule MF_01201 SAAS SAAS001608

Pathway

Amino-acid biosynthesis; D-alanine biosynthesis; D-alanine from L-alanine: step 1/1. HAMAP-Rule MF_01201

Sequence similarities

Belongs to the alanine racemase family. HAMAP-Rule MF_01201 RuleBase RU004188

Ontologies

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Active site401Proton acceptor; specific for D-alanine By similarity HAMAP-Rule MF_01201
Active site2591Proton acceptor; specific for L-alanine By similarity HAMAP-Rule MF_01201
Binding site1381Substrate By similarity HAMAP-Rule MF_01201
Binding site3121Substrate; via amide nitrogen By similarity HAMAP-Rule MF_01201

Amino acid modifications

Modified residue401N6-(pyridoxal phosphate)lysine By similarity HAMAP-Rule MF_01201

Sequences

Sequence LengthMass (Da)Tools
G4RFZ7 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: EB58639950F343AA

FASTA37740,364
        10         20         30         40         50         60 
MTSSKSILGG GITIDLDAIV RNWKALDTVS GKSLTGAVLK ADGYGTGAKT VGRALYKAGA 

        70         80         90        100        110        120 
RFFFVATPDE GVVLREAIPN AFIFVLDGLI PRTAADYAAH GLMPVLASMS QLTEWLDFCL 

       130        140        150        160        170        180 
NRGKAAPAAL HFDTGFNRVG FRMKEAELVA RELKQSGFEP QMIMSHFACA DQPSHEMTRK 

       190        200        210        220        230        240 
QNGLFQGLLN HFPDVPASIA NSAAVMSSKD YHYHLVRPGI AMYGGRAING RPNPMAPVIS 

       250        260        270        280        290        300 
MDVPILQIKD ARIGETVGYG AAYRLRRDTR IAIMALGYAD GYFRGLSGIG GQMGGRVAVN 

       310        320        330        340        350        360 
GTIVPVLGRI SMDMTAIDIT DVQGLVQPGD PVEILGPNIS IDDVADAART IGYEVLTTLN 

       370 
GRFPRSYINV PDGVSLD 

« Hide

References

[1]"Complete Genome Sequence of Pelagibacterium halotolerans B2T."
Huo Y.Y., Cheng H., Han X.F., Jiang X.W., Sun C., Zhang X.Q., Zhu X.F., Liu Y.F., Li P.F., Ni P.X., Wu M.
J. Bacteriol. 194:197-198(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 15775 / CGMCC 1.7692 / B2.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003075 Genomic DNA. Translation: AEQ51040.1.
RefSeqYP_004898790.1. NC_016078.1.

3D structure databases

ProteinModelPortalG4RFZ7.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEQ51040; AEQ51040; KKY_1005.
GeneID11345225.
KEGGphl:KKY_1005.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01775.
OMATRIAIMA.

Enzyme and pathway databases

BioCycPHAL1082931:GJXT-1002-MONOMER.
UniPathwayUPA00042; UER00497.

Family and domain databases

Gene3D2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPMF_01201. Ala_racemase.
InterProIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSPR00992. ALARACEMASE.
SMARTSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsTIGR00492. alr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG4RFZ7_PELHB
AccessionPrimary (citable) accession number: G4RFZ7
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: July 9, 2014
This is version 23 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)