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G4RFZ7

- G4RFZ7_PELHB

UniProt

G4RFZ7 - G4RFZ7_PELHB

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Protein

Alanine racemase

Gene
KKY_1005
Organism
Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2)
Status
Unreviewed - Annotation score: 2 out of 5 - Experimental evidence at protein leveli

Functioni

Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids By similarity.UniRule annotation

Catalytic activityi

L-alanine = D-alanine.UniRule annotation

Cofactori

Pyridoxal phosphate By similarity.UniRule annotationSAAS annotations

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Active sitei40 – 401Proton acceptor; specific for D-alanine By similarityUniRule annotation
Binding sitei138 – 1381Substrate By similarityUniRule annotation
Active sitei259 – 2591Proton acceptor; specific for L-alanine By similarityUniRule annotation
Binding sitei312 – 3121Substrate; via amide nitrogen By similarityUniRule annotation

GO - Molecular functioni

  1. alanine racemase activity Source: UniProtKB-HAMAP
  2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

GO - Biological processi

  1. D-alanine biosynthetic process Source: UniProtKB-UniPathway
Complete GO annotation...

Keywords - Molecular functioni

IsomeraseUniRule annotationSAAS annotations

Keywords - Ligandi

Pyridoxal phosphateUniRule annotationSAAS annotations

Enzyme and pathway databases

BioCyciPHAL1082931:GJXT-1002-MONOMER.
UniPathwayiUPA00042; UER00497.

Names & Taxonomyi

Protein namesi
Recommended name:
Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
Gene namesi
Ordered Locus Names:KKY_1005Imported
OrganismiPelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2)Imported
Taxonomic identifieri1082931 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaAlphaproteobacteriaRhizobialesHyphomicrobiaceaePelagibacterium
ProteomesiUP000008850: Chromosome

PTM / Processingi

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei40 – 401N6-(pyridoxal phosphate)lysine By similarityUniRule annotation

Structurei

3D structure databases

ProteinModelPortaliG4RFZ7.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

KOiK01775.
OMAiTRIAIMA.

Family and domain databases

Gene3Di2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPiMF_01201. Ala_racemase.
InterProiIPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view]
PfamiPF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view]
PRINTSiPR00992. ALARACEMASE.
SMARTiSM01005. Ala_racemase_C. 1 hit.
[Graphical view]
SUPFAMiSSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsiTIGR00492. alr. 1 hit.

Sequencei

Sequence statusi: Complete.

G4RFZ7-1 [UniParc]FASTAAdd to Basket

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MTSSKSILGG GITIDLDAIV RNWKALDTVS GKSLTGAVLK ADGYGTGAKT    50
VGRALYKAGA RFFFVATPDE GVVLREAIPN AFIFVLDGLI PRTAADYAAH 100
GLMPVLASMS QLTEWLDFCL NRGKAAPAAL HFDTGFNRVG FRMKEAELVA 150
RELKQSGFEP QMIMSHFACA DQPSHEMTRK QNGLFQGLLN HFPDVPASIA 200
NSAAVMSSKD YHYHLVRPGI AMYGGRAING RPNPMAPVIS MDVPILQIKD 250
ARIGETVGYG AAYRLRRDTR IAIMALGYAD GYFRGLSGIG GQMGGRVAVN 300
GTIVPVLGRI SMDMTAIDIT DVQGLVQPGD PVEILGPNIS IDDVADAART 350
IGYEVLTTLN GRFPRSYINV PDGVSLD 377
Length:377
Mass (Da):40,364
Last modified:December 14, 2011 - v1
Checksum:iEB58639950F343AA
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003075 Genomic DNA. Translation: AEQ51040.1.
RefSeqiWP_014130189.1. NC_016078.1.
YP_004898790.1. NC_016078.1.

Genome annotation databases

EnsemblBacteriaiAEQ51040; AEQ51040; KKY_1005.
GeneIDi11345225.
KEGGiphl:KKY_1005.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003075 Genomic DNA. Translation: AEQ51040.1 .
RefSeqi WP_014130189.1. NC_016078.1.
YP_004898790.1. NC_016078.1.

3D structure databases

ProteinModelPortali G4RFZ7.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEQ51040 ; AEQ51040 ; KKY_1005 .
GeneIDi 11345225.
KEGGi phl:KKY_1005.

Phylogenomic databases

KOi K01775.
OMAi TRIAIMA.

Enzyme and pathway databases

UniPathwayi UPA00042 ; UER00497 .
BioCyci PHAL1082931:GJXT-1002-MONOMER.

Family and domain databases

Gene3Di 2.40.37.10. 1 hit.
3.20.20.10. 1 hit.
HAMAPi MF_01201. Ala_racemase.
InterProi IPR000821. Ala_racemase.
IPR009006. Ala_racemase/Decarboxylase_C.
IPR011079. Ala_racemase_C.
IPR001608. Ala_racemase_N.
IPR029066. PLP-binding_barrel.
[Graphical view ]
Pfami PF00842. Ala_racemase_C. 1 hit.
PF01168. Ala_racemase_N. 1 hit.
[Graphical view ]
PRINTSi PR00992. ALARACEMASE.
SMARTi SM01005. Ala_racemase_C. 1 hit.
[Graphical view ]
SUPFAMi SSF50621. SSF50621. 1 hit.
SSF51419. SSF51419. 1 hit.
TIGRFAMsi TIGR00492. alr. 1 hit.
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 15775 / CGMCC 1.7692 / B2.

Entry informationi

Entry nameiG4RFZ7_PELHB
AccessioniPrimary (citable) accession number: G4RFZ7
Entry historyi
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: September 3, 2014
This is version 24 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

Similar proteinsi