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G4QIH1

- G4QIH1_GLANF

UniProt

G4QIH1 - G4QIH1_GLANF

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Protein
Submitted name: DNA ligase
Gene
GNIT_2788
Organism
Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: InterPro

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciGNIT1085623:GJU2-2788-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
DNA ligaseImported
Gene namesi
Ordered Locus Names:GNIT_2788Imported
OrganismiGlaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064)Imported
Taxonomic identifieri1085623 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeGlaciecola
ProteomesiUP000009282: Chromosome

Structurei

3D structure databases

ProteinModelPortaliG4QIH1.

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

Gene3Di2.40.50.140. 1 hit.
InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view]
SUPFAMiSSF50249. SSF50249. 1 hit.

Sequencei

Sequence statusi: Complete.

G4QIH1-1 [UniParc]FASTAAdd to Basket

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MIFYSKFSIA KAILLLLASF VLALFLATES AQAFNDTSLP NVQLAEVYDK    50
QNVQDYLISE KYDGVRAIWK DRTLQSRSGN IIHAPTWFTE GLPDVWLDGE 100
LWYRRGDFEY VVSTVNKDIP VNSEWKNITY MVFDAPNYNA DFQSRATFYT 150
SLIQSLHLAH VKAVDQFSLT TNAELSAYLK NYVAEGAEGL MLQKADAKFA 200
DGRSSNLLKL KPYMDAEARV LAHLEGKGKY RDKVGAILVL YSNASGSKIT 250
FKIGSGFSDE ERANPPPIGS VVTFKYHGFT KRGVPRFASY LRMYKPS 297
Length:297
Mass (Da):33,457
Last modified:December 14, 2011 - v1
Checksum:iD92511CF401541BE
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003060 Genomic DNA. Translation: AEP30885.1.
RefSeqiYP_004872878.1. NC_016041.1.

Genome annotation databases

EnsemblBacteriaiAEP30885; AEP30885; GNIT_2788.
GeneIDi11182319.
KEGGigni:GNIT_2788.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP003060 Genomic DNA. Translation: AEP30885.1 .
RefSeqi YP_004872878.1. NC_016041.1.

3D structure databases

ProteinModelPortali G4QIH1.
ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEP30885 ; AEP30885 ; GNIT_2788 .
GeneIDi 11182319.
KEGGi gni:GNIT_2788.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci GNIT1085623:GJU2-2788-MONOMER.

Family and domain databases

Gene3Di 2.40.50.140. 1 hit.
InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR029319. DNA_ligase_OB.
IPR012340. NA-bd_OB-fold.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
PF14743. DNA_ligase_OB_2. 1 hit.
[Graphical view ]
SUPFAMi SSF50249. SSF50249. 1 hit.
ProtoNeti Search...

Publicationsi

  1. "Complete Genome Sequence of Seawater Bacterium Glaciecola nitratireducens FR1064T."
    Bian F., Qin Q.L., Xie B.B., Shu Y.L., Zhang X.Y., Yu Y., Chen B., Chen X.L., Zhou B.C., Zhang Y.Z.
    J. Bacteriol. 193:7006-7007(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 12485 / KCTC 12276 / FR1064.

Entry informationi

Entry nameiG4QIH1_GLANF
AccessioniPrimary (citable) accession number: G4QIH1
Entry historyi
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: June 11, 2014
This is version 16 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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