Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

G4QIH1

- G4QIH1_GLANF

UniProt

G4QIH1 - G4QIH1_GLANF

Protein
Submitted name:

DNA ligase

Gene

GNIT_2788

Organism
Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 17 (01 Oct 2014)
      Sequence version 1 (14 Dec 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: InterPro

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciGNIT1085623:GJU2-2788-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    DNA ligaseImported
    Gene namesi
    Ordered Locus Names:GNIT_2788Imported
    OrganismiGlaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064)Imported
    Taxonomic identifieri1085623 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeGlaciecola
    ProteomesiUP000009282: Chromosome

    Structurei

    3D structure databases

    ProteinModelPortaliG4QIH1.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    Gene3Di2.40.50.140. 1 hit.
    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF50249. SSF50249. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    G4QIH1-1 [UniParc]FASTAAdd to Basket

    « Hide

    MIFYSKFSIA KAILLLLASF VLALFLATES AQAFNDTSLP NVQLAEVYDK    50
    QNVQDYLISE KYDGVRAIWK DRTLQSRSGN IIHAPTWFTE GLPDVWLDGE 100
    LWYRRGDFEY VVSTVNKDIP VNSEWKNITY MVFDAPNYNA DFQSRATFYT 150
    SLIQSLHLAH VKAVDQFSLT TNAELSAYLK NYVAEGAEGL MLQKADAKFA 200
    DGRSSNLLKL KPYMDAEARV LAHLEGKGKY RDKVGAILVL YSNASGSKIT 250
    FKIGSGFSDE ERANPPPIGS VVTFKYHGFT KRGVPRFASY LRMYKPS 297
    Length:297
    Mass (Da):33,457
    Last modified:December 14, 2011 - v1
    Checksum:iD92511CF401541BE
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003060 Genomic DNA. Translation: AEP30885.1.
    RefSeqiYP_004872878.1. NC_016041.1.

    Genome annotation databases

    EnsemblBacteriaiAEP30885; AEP30885; GNIT_2788.
    GeneIDi11182319.
    KEGGigni:GNIT_2788.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003060 Genomic DNA. Translation: AEP30885.1 .
    RefSeqi YP_004872878.1. NC_016041.1.

    3D structure databases

    ProteinModelPortali G4QIH1.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEP30885 ; AEP30885 ; GNIT_2788 .
    GeneIDi 11182319.
    KEGGi gni:GNIT_2788.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci GNIT1085623:GJU2-2788-MONOMER.

    Family and domain databases

    Gene3Di 2.40.50.140. 1 hit.
    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR029319. DNA_ligase_OB.
    IPR012340. NA-bd_OB-fold.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    PF14743. DNA_ligase_OB_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50249. SSF50249. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of seawater bacterium Glaciecola nitratireducens FR1064T."
      Bian F., Qin Q.L., Xie B.B., Shu Y.L., Zhang X.Y., Yu Y., Chen B., Chen X.L., Zhou B.C., Zhang Y.Z.
      J. Bacteriol. 193:7006-7007(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JCM 12485 / KCTC 12276 / FR1064Imported.

    Entry informationi

    Entry nameiG4QIH1_GLANF
    AccessioniPrimary (citable) accession number: G4QIH1
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 14, 2011
    Last sequence update: December 14, 2011
    Last modified: October 1, 2014
    This is version 17 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3