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G4QIH1 (G4QIH1_GLANF) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 11. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesSubmitted name:
DNA ligase EMBL AEP30885.1
Gene names
Ordered Locus Names:GNIT_2788 EMBL AEP30885.1
OrganismGlaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) [Complete proteome] [HAMAP]
Taxonomic identifier1085623 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Glaciecola ›

Protein attributes

Sequence length297 AA.
Sequence statusComplete.
Protein existencePredicted

Ontologies

Keywords
   Molecular functionLigase EMBL AEP30885.1
   Technical termComplete proteome
Gene Ontology (GO)
   Biological_processDNA recombination

Inferred from electronic annotation. Source: InterPro

DNA repair

Inferred from electronic annotation. Source: InterPro

   Molecular_functionATP binding

Inferred from electronic annotation. Source: InterPro

DNA ligase (ATP) activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G4QIH1 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: D92511CF401541BE

FASTA29733,457
        10         20         30         40         50         60 
MIFYSKFSIA KAILLLLASF VLALFLATES AQAFNDTSLP NVQLAEVYDK QNVQDYLISE 

        70         80         90        100        110        120 
KYDGVRAIWK DRTLQSRSGN IIHAPTWFTE GLPDVWLDGE LWYRRGDFEY VVSTVNKDIP 

       130        140        150        160        170        180 
VNSEWKNITY MVFDAPNYNA DFQSRATFYT SLIQSLHLAH VKAVDQFSLT TNAELSAYLK 

       190        200        210        220        230        240 
NYVAEGAEGL MLQKADAKFA DGRSSNLLKL KPYMDAEARV LAHLEGKGKY RDKVGAILVL 

       250        260        270        280        290 
YSNASGSKIT FKIGSGFSDE ERANPPPIGS VVTFKYHGFT KRGVPRFASY LRMYKPS

« Hide

References

[1]"Complete genome sequence of seawater bacterium Glaciecola nitratireducens FR1064T."
Bian F., Qin Q.L., Xie B.B., Shu Y.L., Zhang X.Y., Yu Y., Chen B., Chen X.L., Zhou B.C., Zhang Y.Z.
J. Bacteriol. 193:7006-7007(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 12485 / KCTC 12276 / FR1064.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003060 Genomic DNA. Translation: AEP30885.1.
RefSeqYP_004872878.1. NC_016041.1.

3D structure databases

ProteinModelPortalG4QIH1.
ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEP30885; AEP30885; GNIT_2788.
GeneID11182319.
KEGGgni:GNIT_2788.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01971.

Enzyme and pathway databases

BioCycGNIT1085623:GJU2-2788-MONOMER.

Family and domain databases

Gene3D2.40.50.140. 1 hit.
InterProIPR012310. DNA_ligase_ATP-dep_cent.
IPR012340. NA-bd_OB-fold.
[Graphical view]
PfamPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
SUPFAMSSF50249. Nucleic_acid_OB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG4QIH1_GLANF
AccessionPrimary (citable) accession number: G4QIH1
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
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