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Protein
Submitted name:

Glutamate decarboxylase putative

Gene

gadB

Organism
Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Cofactori

pyridoxal 5'-phosphateUniRule annotation

GO - Molecular functioni

  1. carboxy-lyase activity Source: InterPro
  2. pyridoxal phosphate binding Source: InterPro

GO - Biological processi

  1. carboxylic acid metabolic process Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LyaseUniRule annotation

Keywords - Ligandi

Pyridoxal phosphateUniRule annotation

Enzyme and pathway databases

BioCyciGNIT1085623:GJU2-2987-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Glutamate decarboxylase putativeImported
Gene namesi
Name:gadBImported
Ordered Locus Names:GNIT_2987Imported
OrganismiGlaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064)Imported
Taxonomic identifieri1085623 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeGlaciecola
ProteomesiUP000009282: Chromosome

Family & Domainsi

Sequence similaritiesi

Belongs to the group II decarboxylase family.UniRule annotation

Phylogenomic databases

KOiK01580.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

Sequencei

Sequence statusi: Complete.

G4QDQ4-1 [UniParc]FASTAAdd to Basket

« Hide

        10         20         30         40         50
MAKAEVSLEH LFRVFTKPEH SDSTLAKIER HLSDNISDFL SQHVVTKKTS
60 70 80 90 100
LEEIEKDFFS AAVPDSPEFV SEHAESLLTK LVAHSVNTYS PTFIGHMTSA
110 120 130 140 150
LPYFHLTLAK LLVGLNQNLV KIETSKAFTP LERQTLGMMH NLIYQQDDKF
160 170 180 190 200
YEDYLHSADH SLGSFCSGGT VANITALWVA RNQLFSADGK FPGVAKAGLA
210 220 230 240 250
AAYRHYGYDN IGVMSSNRGH YSLSKTVDVL GIGRNNMLTV HSPTQKLDPH
260 270 280 290 300
QALRLGKAYQ ESGNKLLAIV GVAGTTETGH VDPLDELADV AKELDCWFHV
310 320 330 340 350
DAAWGGATLF SERYRGKLAG IEHADSVTID AHKQMYVPMG AGMALFKDPK
360 370 380 390 400
HSNAVRHHAQ YILREGSKDL GATTLEGSRN GMALMVYSSL HILGRRGYEL
410 420 430 440 450
LINKSIELAL EFAAMINAHP DFELTTQPTL SLLTYRLRPQ TLSGLENMPV
460 470 480 490 500
SDIANINKKL DSLTVSVQKQ QREAGKSFVS RTRIEIEKYN GEVITVFRVV
510 520 530 540
LANPLTTKEH LSDILEEQIE IASNNRIWNS LSTNLSTKIA
Length:540
Mass (Da):59,775
Last modified:December 14, 2011 - v1
Checksum:i1EB2FA2D48744FE9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003060 Genomic DNA. Translation: AEP31083.1.
RefSeqiWP_014109955.1. NC_016041.1.
YP_004873076.1. NC_016041.1.

Genome annotation databases

EnsemblBacteriaiAEP31083; AEP31083; GNIT_2987.
GeneIDi11180597.
KEGGigni:GNIT_2987.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP003060 Genomic DNA. Translation: AEP31083.1.
RefSeqiWP_014109955.1. NC_016041.1.
YP_004873076.1. NC_016041.1.

3D structure databases

ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAEP31083; AEP31083; GNIT_2987.
GeneIDi11180597.
KEGGigni:GNIT_2987.

Phylogenomic databases

KOiK01580.

Enzyme and pathway databases

BioCyciGNIT1085623:GJU2-2987-MONOMER.

Family and domain databases

Gene3Di3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProiIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamiPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMiSSF53383. SSF53383. 1 hit.
TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. "Complete genome sequence of seawater bacterium Glaciecola nitratireducens FR1064T."
    Bian F., Qin Q.L., Xie B.B., Shu Y.L., Zhang X.Y., Yu Y., Chen B., Chen X.L., Zhou B.C., Zhang Y.Z.
    J. Bacteriol. 193:7006-7007(2011) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: JCM 12485 / KCTC 12276 / FR1064Imported.

Entry informationi

Entry nameiG4QDQ4_GLANF
AccessioniPrimary (citable) accession number: G4QDQ4
Entry historyi
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: January 7, 2015
This is version 17 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteomeImported

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.