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G4QDQ4 (G4QDQ4_GLANF) Unreviewed, UniProtKB/TrEMBL

Last modified October 16, 2013. Version 13. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
Gene names
Name:gadB EMBL AEP31083.1
Ordered Locus Names:GNIT_2987 EMBL AEP31083.1
OrganismGlaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) [Complete proteome] [HAMAP] EMBL AEP31083.1
Taxonomic identifier1085623 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeGlaciecola

Protein attributes

Sequence length540 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Cofactor

Pyridoxal phosphate By similarity. RuleBase RU000382

Sequence similarities

Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Sequences

Sequence LengthMass (Da)Tools
G4QDQ4 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: 1EB2FA2D48744FE9

FASTA54059,775
        10         20         30         40         50         60 
MAKAEVSLEH LFRVFTKPEH SDSTLAKIER HLSDNISDFL SQHVVTKKTS LEEIEKDFFS 

        70         80         90        100        110        120 
AAVPDSPEFV SEHAESLLTK LVAHSVNTYS PTFIGHMTSA LPYFHLTLAK LLVGLNQNLV 

       130        140        150        160        170        180 
KIETSKAFTP LERQTLGMMH NLIYQQDDKF YEDYLHSADH SLGSFCSGGT VANITALWVA 

       190        200        210        220        230        240 
RNQLFSADGK FPGVAKAGLA AAYRHYGYDN IGVMSSNRGH YSLSKTVDVL GIGRNNMLTV 

       250        260        270        280        290        300 
HSPTQKLDPH QALRLGKAYQ ESGNKLLAIV GVAGTTETGH VDPLDELADV AKELDCWFHV 

       310        320        330        340        350        360 
DAAWGGATLF SERYRGKLAG IEHADSVTID AHKQMYVPMG AGMALFKDPK HSNAVRHHAQ 

       370        380        390        400        410        420 
YILREGSKDL GATTLEGSRN GMALMVYSSL HILGRRGYEL LINKSIELAL EFAAMINAHP 

       430        440        450        460        470        480 
DFELTTQPTL SLLTYRLRPQ TLSGLENMPV SDIANINKKL DSLTVSVQKQ QREAGKSFVS 

       490        500        510        520        530        540 
RTRIEIEKYN GEVITVFRVV LANPLTTKEH LSDILEEQIE IASNNRIWNS LSTNLSTKIA 

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References

[1]"Complete Genome Sequence of Seawater Bacterium Glaciecola nitratireducens FR1064T."
Bian F., Qin Q.L., Xie B.B., Shu Y.L., Zhang X.Y., Yu Y., Chen B., Chen X.L., Zhou B.C., Zhang Y.Z.
J. Bacteriol. 193:7006-7007(2011) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: JCM 12485 / KCTC 12276 / FR1064.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP003060 Genomic DNA. Translation: AEP31083.1.
RefSeqYP_004873076.1. NC_016041.1.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEP31083; AEP31083; GNIT_2987.
GeneID11180597.
KEGGgni:GNIT_2987.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK01580.

Enzyme and pathway databases

BioCycGNIT1085623:GJU2-2987-MONOMER.

Family and domain databases

Gene3D3.40.640.10. 1 hit.
3.90.1150.10. 1 hit.
InterProIPR022517. Asp_decarboxylase_pyridox.
IPR002129. PyrdxlP-dep_de-COase.
IPR015424. PyrdxlP-dep_Trfase.
IPR015421. PyrdxlP-dep_Trfase_major_sub1.
IPR015422. PyrdxlP-dep_Trfase_major_sub2.
[Graphical view]
PfamPF00282. Pyridoxal_deC. 1 hit.
[Graphical view]
SUPFAMSSF53383. SSF53383. 1 hit.
TIGRFAMsTIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG4QDQ4_GLANF
AccessionPrimary (citable) accession number: G4QDQ4
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: October 16, 2013
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)