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G4QDQ4

- G4QDQ4_GLANF

UniProt

G4QDQ4 - G4QDQ4_GLANF

Protein
Submitted name:

Glutamate decarboxylase putative

Gene

gadB

Organism
Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064)
Status
Unreviewed - Annotation score: 1 out of 5- Protein inferred from homologyi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (14 Dec 2011)
      Previous versions | rss
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    Functioni

    Cofactori

    Pyridoxal phosphate.UniRule annotation

    GO - Molecular functioni

    1. carboxy-lyase activity Source: InterPro
    2. pyridoxal phosphate binding Source: InterPro

    GO - Biological processi

    1. carboxylic acid metabolic process Source: InterPro

    Keywords - Molecular functioni

    LyaseUniRule annotation

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotation

    Enzyme and pathway databases

    BioCyciGNIT1085623:GJU2-2987-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Glutamate decarboxylase putativeImported
    Gene namesi
    Name:gadBImported
    Ordered Locus Names:GNIT_2987Imported
    OrganismiGlaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064)Imported
    Taxonomic identifieri1085623 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaAlteromonadalesAlteromonadaceaeGlaciecola
    ProteomesiUP000009282: Chromosome

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the group II decarboxylase family.UniRule annotation

    Phylogenomic databases

    KOiK01580.

    Family and domain databases

    Gene3Di3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProiIPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view]
    PfamiPF00282. Pyridoxal_deC. 1 hit.
    [Graphical view]
    SUPFAMiSSF53383. SSF53383. 1 hit.
    TIGRFAMsiTIGR03799. NOD_PanD_pyr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    G4QDQ4-1 [UniParc]FASTAAdd to Basket

    « Hide

    MAKAEVSLEH LFRVFTKPEH SDSTLAKIER HLSDNISDFL SQHVVTKKTS    50
    LEEIEKDFFS AAVPDSPEFV SEHAESLLTK LVAHSVNTYS PTFIGHMTSA 100
    LPYFHLTLAK LLVGLNQNLV KIETSKAFTP LERQTLGMMH NLIYQQDDKF 150
    YEDYLHSADH SLGSFCSGGT VANITALWVA RNQLFSADGK FPGVAKAGLA 200
    AAYRHYGYDN IGVMSSNRGH YSLSKTVDVL GIGRNNMLTV HSPTQKLDPH 250
    QALRLGKAYQ ESGNKLLAIV GVAGTTETGH VDPLDELADV AKELDCWFHV 300
    DAAWGGATLF SERYRGKLAG IEHADSVTID AHKQMYVPMG AGMALFKDPK 350
    HSNAVRHHAQ YILREGSKDL GATTLEGSRN GMALMVYSSL HILGRRGYEL 400
    LINKSIELAL EFAAMINAHP DFELTTQPTL SLLTYRLRPQ TLSGLENMPV 450
    SDIANINKKL DSLTVSVQKQ QREAGKSFVS RTRIEIEKYN GEVITVFRVV 500
    LANPLTTKEH LSDILEEQIE IASNNRIWNS LSTNLSTKIA 540
    Length:540
    Mass (Da):59,775
    Last modified:December 14, 2011 - v1
    Checksum:i1EB2FA2D48744FE9
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003060 Genomic DNA. Translation: AEP31083.1.
    RefSeqiWP_014109955.1. NC_016041.1.
    YP_004873076.1. NC_016041.1.

    Genome annotation databases

    EnsemblBacteriaiAEP31083; AEP31083; GNIT_2987.
    GeneIDi11180597.
    KEGGigni:GNIT_2987.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP003060 Genomic DNA. Translation: AEP31083.1 .
    RefSeqi WP_014109955.1. NC_016041.1.
    YP_004873076.1. NC_016041.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEP31083 ; AEP31083 ; GNIT_2987 .
    GeneIDi 11180597.
    KEGGi gni:GNIT_2987.

    Phylogenomic databases

    KOi K01580.

    Enzyme and pathway databases

    BioCyci GNIT1085623:GJU2-2987-MONOMER.

    Family and domain databases

    Gene3Di 3.40.640.10. 1 hit.
    3.90.1150.10. 1 hit.
    InterProi IPR022517. Asp_decarboxylase_pyridox.
    IPR002129. PyrdxlP-dep_de-COase.
    IPR015424. PyrdxlP-dep_Trfase.
    IPR015421. PyrdxlP-dep_Trfase_major_sub1.
    IPR015422. PyrdxlP-dep_Trfase_major_sub2.
    [Graphical view ]
    Pfami PF00282. Pyridoxal_deC. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53383. SSF53383. 1 hit.
    TIGRFAMsi TIGR03799. NOD_PanD_pyr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Complete genome sequence of seawater bacterium Glaciecola nitratireducens FR1064T."
      Bian F., Qin Q.L., Xie B.B., Shu Y.L., Zhang X.Y., Yu Y., Chen B., Chen X.L., Zhou B.C., Zhang Y.Z.
      J. Bacteriol. 193:7006-7007(2011) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: JCM 12485 / KCTC 12276 / FR1064Imported.

    Entry informationi

    Entry nameiG4QDQ4_GLANF
    AccessioniPrimary (citable) accession number: G4QDQ4
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 14, 2011
    Last sequence update: December 14, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3