G4QDQ4 (G4QDQ4_GLANF) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Glutamate decarboxylase putative EMBL AEP31083.1

Gene names

Name:	gadB EMBL AEP31083.1
Ordered Locus Names:	GNIT_2987 EMBL AEP31083.1

Organism

Glaciecola nitratireducens (strain JCM 12485 / KCTC 12276 / FR1064) [Complete proteome] [HAMAP]

Taxonomic identifier

1085623 [NCBI]

Taxonomic lineage

cellular organisms › Bacteria › Proteobacteria › Gammaproteobacteria › Alteromonadales › Alteromonadaceae › Glaciecola › Glaciecola nitratireducens

Protein attributes

Sequence length	540 AA.
Sequence status	Complete.
Protein existence	Inferred from homology

General annotation (Comments)

Cofactor	Pyridoxal phosphate By similarity. RuleBase RU000382
Sequence similarities	Belongs to the group II decarboxylase family. RuleBase RU000382

Ontologies

Keywords
Ligand	Pyridoxal phosphate RuleBase RU000382
Molecular function	Lyase RuleBase RU000382
Technical term	Complete proteome
Gene Ontology (GO)
Biological_process	carboxylic acid metabolic process Inferred from electronic annotation. Source: InterPro
Molecular_function	carboxy-lyase activity Inferred from electronic annotation. Source: InterPro pyridoxal phosphate binding Inferred from electronic annotation. Source: InterPro
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	G4QDQ4 [UniParc]. Last modified December 14, 2011. Version 1. Checksum: 1EB2FA2D48744FE9	FASTA	540	59,775
	10 20 30 40 50 60 MAKAEVSLEH LFRVFTKPEH SDSTLAKIER HLSDNISDFL SQHVVTKKTS LEEIEKDFFS 70 80 90 100 110 120 AAVPDSPEFV SEHAESLLTK LVAHSVNTYS PTFIGHMTSA LPYFHLTLAK LLVGLNQNLV 130 140 150 160 170 180 KIETSKAFTP LERQTLGMMH NLIYQQDDKF YEDYLHSADH SLGSFCSGGT VANITALWVA 190 200 210 220 230 240 RNQLFSADGK FPGVAKAGLA AAYRHYGYDN IGVMSSNRGH YSLSKTVDVL GIGRNNMLTV 250 260 270 280 290 300 HSPTQKLDPH QALRLGKAYQ ESGNKLLAIV GVAGTTETGH VDPLDELADV AKELDCWFHV 310 320 330 340 350 360 DAAWGGATLF SERYRGKLAG IEHADSVTID AHKQMYVPMG AGMALFKDPK HSNAVRHHAQ 370 380 390 400 410 420 YILREGSKDL GATTLEGSRN GMALMVYSSL HILGRRGYEL LINKSIELAL EFAAMINAHP 430 440 450 460 470 480 DFELTTQPTL SLLTYRLRPQ TLSGLENMPV SDIANINKKL DSLTVSVQKQ QREAGKSFVS 490 500 510 520 530 540 RTRIEIEKYN GEVITVFRVV LANPLTTKEH LSDILEEQIE IASNNRIWNS LSTNLSTKIA

References

[1]

"Complete genome sequence of seawater bacterium Glaciecola nitratireducens FR1064T." Bian F., Qin Q.L., Xie B.B., Shu Y.L., Zhang X.Y., Yu Y., Chen B., Chen X.L., Zhou B.C., Zhang Y.Z. J. Bacteriol. 193:7006-7007(2011) [PubMed] [Europe PMC] [Abstract] Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]. Strain: JCM 12485 / KCTC 12276 / FR1064.

Cross-references

Sequence databases
EMBL GenBank DDBJ	CP003060 Genomic DNA. Translation: AEP31083.1.
RefSeq	YP_004873076.1. NC_016041.1.
3D structure databases
ModBase	Search...
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Genome annotation databases
EnsemblBacteria	AEP31083; AEP31083; GNIT_2987.
GeneID	11180597.
KEGG	gni:GNIT_2987.
Organism-specific databases
CMR	Search...
Phylogenomic databases
KO	K01580.
Enzyme and pathway databases
BioCyc	GNIT1085623:GJU2-2987-MONOMER.
Family and domain databases
Gene3D	3.40.640.10. 1 hit. 3.90.1150.10. 1 hit.
InterPro	IPR022517. Asp_decarboxylase_pyridox. IPR002129. PyrdxlP-dep_de-COase. IPR015424. PyrdxlP-dep_Trfase. IPR015421. PyrdxlP-dep_Trfase_major_sub1. IPR015422. PyrdxlP-dep_Trfase_major_sub2. [Graphical view]
Pfam	PF00282. Pyridoxal_deC. 1 hit. [Graphical view]
SUPFAM	SSF53383. PyrdxlP-dep_Trfase_major. 1 hit.
TIGRFAMs	TIGR03799. NOD_PanD_pyr. 1 hit.
ProtoNet	Search...

Entry information

Entry name

G4QDQ4_GLANF

Accession

Primary (citable) accession number: G4QDQ4

Entry history

Integrated into UniProtKB/TrEMBL:	December 14, 2011
Last sequence update:	December 14, 2011
Last modified:	April 3, 2013
This is version 11 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)