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G4QB22 (G4QB22_TAYAM) Unreviewed, UniProtKB/TrEMBL

Last modified May 1, 2013. Version 15. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
UvrABC system protein C HAMAP-Rule MF_00203
Short name=Protein UvrC HAMAP-Rule MF_00203
Alternative name(s):
Excinuclease ABC subunit C HAMAP-Rule MF_00203
Gene names
Name:uvrC HAMAP-Rule MF_00203
Ordered Locus Names:TASI_0793
OrganismTaylorella asinigenitalis (strain MCE3) [Complete proteome] [HAMAP] EMBL AEP36563.1
Taxonomic identifier1008459 [NCBI]
Taxonomic lineageBacteria › Proteobacteria › Betaproteobacteria › Burkholderiales › Alcaligenaceae › Taylorella ›

Protein attributes

Sequence length607 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision By similarity. HAMAP-Rule MF_00203 SAAS SAAS004791

Subunit structure

Interacts with UvrB in an incision complex By similarity. HAMAP-Rule MF_00203 SAAS SAAS004791

Subcellular location

Cytoplasm By similarity HAMAP-Rule MF_00203 SAAS SAAS004791.

Sequence similarities

Belongs to the UvrC family. HAMAP-Rule MF_00203

Contains 1 GIY-YIG domain. HAMAP-Rule MF_00203 SAAS SAAS004791

Contains 1 UVR domain. HAMAP-Rule MF_00203 SAAS SAAS004791

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Domain16 – 9479GIY-YIG By similarity HAMAP-Rule MF_00203
Domain203 – 23836UVR By similarity HAMAP-Rule MF_00203

Sequences

Sequence LengthMass (Da)Tools
G4QB22 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: B9CE93659BBB3AEB

FASTA60768,504
        10         20         30         40         50         60 
MQDPQQIKSF LKELPDLPGV YRHIDASDTV LYVGKAKNLK KRVSQYYAKT IQSPRVALMM 

        70         80         90        100        110        120 
AKVVRTEYTI TNSESEALIL ENNLIKSLHP RYNILFRDDK TYPFLKFSAH EFPQISFYRG 

       130        140        150        160        170        180 
ATNKPGKYFG PYPNGYAVGQ TIEVLQRVFR LRTCNDSVFQ NRSRPCMQYQ IKRCSAPCTG 

       190        200        210        220        230        240 
FITKDEYEND IKNAIDFLDG KAPEVLKNIE SKMMMASDIM NYELAAIYRD QIKALGTVMN 

       250        260        270        280        290        300 
SQSMEVNPKI NCDIIAIEQI EGKVCINLAM VRKGRHLGDK SMFPTQVNAN EASTILEAFI 

       310        320        330        340        350        360 
SSHYLSHEIP SMLVLSHELK DRGVIDIFEE KYHKKVRVVA RPNALQKSWL ELAIKNAQLA 

       370        380        390        400        410        420 
LSREINESTK AEKRTLALAE TLGYATDPDA LNSLSIECFD ISHTSGEATQ ASCVVYQFHD 

       430        440        450        460        470        480 
MQSSRYRRYN IHGITEGDDY AAMEQVLTRR YSSFLKEGVD LPDIVLIDGG KGQIGVAKRV 

       490        500        510        520        530        540 
FEDLGLDLSK IVGVAKGEGR KVGLETLHFV DGRAPLELGV QSMALMLIAS IRDEAHRFAI 

       550        560        570        580        590        600 
TGMRSRRAKQ RNVSRLEDID GVGPKRRQKL LARFGGFTEV CNASIADLQS VDGISREIAE 


KIYYALR

« Hide

References

« Hide 'large scale' references
[1]"Genomic characterization of the Taylorella genus."
Hebert L., Moumen B., Pons N., Duquesne F., Breuil M.-F., Goux D., Batto J.-M., Renault P., Laugier C., Petry S.
Submitted (SEP-2011) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MCE3.
[2]"Genomic characterization of the taylorella genus."
Hebert L., Moumen B., Pons N., Duquesne F., Breuil M.F., Goux D., Batto J.M., Laugier C., Renault P., Petry S.
PLoS ONE 7:E29953-E29953(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: MCE3.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP003059 Genomic DNA. Translation: AEP36563.1.
RefSeqYP_004874586.1. NC_016043.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEP36563; AEP36563; TASI_0793.
GeneID11185808.
KEGGtas:TASI_0793.

Organism-specific databases

CMRSearch...

Phylogenomic databases

KOK03703.

Family and domain databases

Gene3D3.40.1440.10. 1 hit.
4.10.860.10. 1 hit.
HAMAPMF_00203. UvrC.
InterProIPR027299. GIY-YIG_dom.
IPR000305. GIY-YIG_SF.
IPR003583. Hlx-hairpin-Hlx_DNA-bd_motif.
IPR010994. RuvA_2-like.
IPR001943. UVR_dom.
IPR004791. UvrC.
IPR001162. UvrC_homol_region.
[Graphical view]
PfamPF01541. GIY-YIG. 1 hit.
PF02151. UVR. 1 hit.
PF08459. UvrC_HhH_N. 1 hit.
[Graphical view]
SMARTSM00465. GIYc. 1 hit.
SM00278. HhH1. 2 hits.
[Graphical view]
SUPFAMSSF47781. RuvA_2_like. 1 hit.
SSF46600. UvrB_C. 1 hit.
SSF82771. UvrC_N. 1 hit.
TIGRFAMsTIGR00194. uvrC. 1 hit.
PROSITEPS50164. GIY_YIG. 1 hit.
PS50151. UVR. 1 hit.
PS50165. UVRC. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG4QB22_TAYAM
AccessionPrimary (citable) accession number: G4QB22
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: May 1, 2013
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info