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G4NW46 (G4NW46_BACPN) Unreviewed, UniProtKB/TrEMBL

Last modified April 3, 2013. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein namesRecommended name:
Phosphopentomutase HAMAP-Rule MF_00740
EC=5.4.2.7 HAMAP-Rule MF_00740
Alternative name(s):
Phosphodeoxyribomutase HAMAP-Rule MF_00740
Gene names
Name:deoB HAMAP-Rule MF_00740 EMBL AEP87198.1
ORF Names:GYO_2585 EMBL AEP87198.1
OrganismBacillus subtilis subsp. spizizenii TU-B-10 EMBL AEP87198.1
Taxonomic identifier1052585 [NCBI]
Taxonomic lineageBacteria › Firmicutes › Bacilli › Bacillales › Bacillaceae › Bacillus ›

Protein attributes

Sequence length394 AA.
Sequence statusComplete.
Protein existenceInferred from homology

General annotation (Comments)

Function

Phosphotransfer between the C1 and C5 carbon atoms of pentose By similarity. SAAS SAAS024052 HAMAP-Rule MF_00740

Catalytic activity

2-deoxy-alpha-D-ribose 1-phosphate = 2-deoxy-alpha-D-ribose 5-phosphate. SAAS SAAS024052 HAMAP-Rule MF_00740

Alpha-D-ribose 1-phosphate = D-ribose 5-phosphate. SAAS SAAS024052 HAMAP-Rule MF_00740

Cofactor

Binds 1 or 2 manganese ions By similarity. SAAS SAAS024052 HAMAP-Rule MF_00740

Pathway

Metabolic intermediate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate biosynthesis; 5-phospho-alpha-D-ribose 1-diphosphate from D-ribose 5-phosphate (route II): step 1/3. SAAS SAAS024052 HAMAP-Rule MF_00740

Subcellular location

Cytoplasm By similarity SAAS SAAS024052 HAMAP-Rule MF_00740.

Sequence similarities

Belongs to the phosphopentomutase family. HAMAP-Rule MF_00740

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Sites

Metal binding151Manganese By similarity HAMAP-Rule MF_00740
Metal binding2931Manganese By similarity HAMAP-Rule MF_00740
Metal binding3291Manganese By similarity HAMAP-Rule MF_00740
Metal binding3301Manganese By similarity HAMAP-Rule MF_00740
Metal binding3411Manganese By similarity HAMAP-Rule MF_00740

Sequences

Sequence LengthMass (Da)Tools
G4NW46 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: 35DC2FB4F1F59964

FASTA39443,890
        10         20         30         40         50         60 
MPAYKYNRVF LIVMDSVGIG EAPDAADFND EGANTLGHIA EHMNGLHMPN MAKLGLGLIG 

        70         80         90        100        110        120 
DIKGVEKTEY PLAYFGKMQE ASNGKDTMTG HWEIMGLYID KPFKVFPEGF PDELLQELEK 

       130        140        150        160        170        180 
RSGRKIIGNK PASGTAILDE LGQEHMETGA LIVYTSADSV LQIAAHEEVV PLEELYRICE 

       190        200        210        220        230        240 
TARELTLDPK YMVGRIIARP FVGEPGQFKR TPNRHDYALK PFDRTVMNEL KDSGLDVISI 

       250        260        270        280        290        300 
GKISDIYDGE GITSSRRTVS NMDGMDKVID TLGEDFTGLS FANLVDFDAL FGHRRDPEGY 

       310        320        330        340        350        360 
GRALEEFDAR LPEVFEKMKE DDLLIITADH GNDPIHHGTD HTREYVPILA YSKKHKKAQM 

       370        380        390 
LPLADTFADI GATIADNFQT NKPKYGKSFL SLLQ

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References

[1]"Whole-Genome Sequences of Bacillus subtilis and Close Relatives."
Earl A.M., Eppinger M., Fricke W.F., Rosovitz M.J., Rasko D.A., Daugherty S., Losick R., Kolter R., Ravel J.
J. Bacteriol. 194:2378-2379(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: TU-B-10 EMBL AEP87198.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ		CP002905 Genomic DNA. Translation: AEP87198.1.
RefSeqYP_004877830.1. NC_016047.1.

3D structure databases

ModBaseSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAEP87198; AEP87198; GYO_2585.
GeneID11240013.
KEGGbst:GYO_2585.

Phylogenomic databases

KOK01839.

Enzyme and pathway databases

BioCycBSUB1052585:GJWW-2556-MONOMER.
UniPathwayUPA00087; UER00173.

Family and domain databases

Gene3D3.30.70.1250. 1 hit.
3.40.720.10. 2 hits.
HAMAPMF_00740. Phosphopentomut.
InterProIPR017849. Alkaline_Pase-like_a/b/a.
IPR017850. Alkaline_phosphatase_core.
IPR010045. DeoB.
IPR006124. Metalloenzyme.
IPR024052. Phosphopentomutase_DeoB_cap.
[Graphical view]
PfamPF01676. Metalloenzyme. 1 hit.
[Graphical view]
PIRSFPIRSF001491. Ppentomutase. 1 hit.
SUPFAMSSF53649. Alkaline_phosphatase_core. 1 hit.
SSF143856. SSF143856. 1 hit.
TIGRFAMsTIGR01696. deoB. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG4NW46_BACPN
AccessionPrimary (citable) accession number: G4NW46
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: April 3, 2013
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info