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G4NV71

- G4NV71_BACPT

UniProt

G4NV71 - G4NV71_BACPT

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Protein
Submitted name:

Spore germination DNA ligase YkoU

Gene

ykoU

Organism
Bacillus subtilis subsp. spizizenii (strain TU-B-10)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBSUB1052585:GJWW-1651-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Spore germination DNA ligase YkoUImported (EC:6.5.1.1Imported)
Gene namesi
Name:ykoUImported
Ordered Locus Names:GYO_1664Imported
OrganismiBacillus subtilis subsp. spizizenii (strain TU-B-10)Imported
Taxonomic identifieri1052585 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000002651: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G4NV71-1 [UniParc]FASTAAdd to Basket

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        10         20         30         40         50
MQPVLTSSPP IGAEWRYEVK YDGYRCILRI HSAGVTLTSR NGLELNSSFP
60 70 80 90 100
EITQFAKTAF LHMEKDLPLT LDGEIVCLVN PCRSDFEHIQ VRGRLKRPDK
110 120 130 140 150
IQESANARPC CFLAFDLLER RGEDISPLSY LDRKKSLYDL MSAAKLPASP
160 170 180 190 200
DPYAKETIQY IPCYDHFDPL WRMVTKFDGE GIVAKKTNSK WLERKRSSDW
210 220 230 240 250
LKYKNFKQAY VCITGFNPNN GFLTVSVLKN GVMTPIASVS HGMRDEEKNA
260 270 280 290 300
IREIMEQHGH KTSSGEFTLE PSICATVQYL TILQGTLREV SFVGFEFHMD
310 320 330 340 350
WTECTYAQVI RHSKSVHPKL QFTSLDKIIF EKNKKTKEDF IQYMIEVSDY
360 370 380 390 400
LFPFLKNRAV TVIRYPHGSR SESFFQKNKP DYAPDFVQSF YDGSHEHIVC
410 420 430 440 450
EDMSTLLWLA NQLALEFHVP FQTIQSRRPA EIVIDLDPPS RDDFLMAVQA
460 470 480 490 500
ANELKRLFDS FGITSFPKLS GNKGIQLYIP LSPEAFTYEE TRQFTQLIAE
510 520 530 540 550
YCTNAFPELF TTERLIKNRH GKLYLDYLQH AEGKTIICPY STRGNDLGTV
560 570 580 590 600
AAPLYWHEVQ TSLTPAMFTI DTVVDRIKKQ GCPFFDFYRN PQDEPLNAIL

HQLKKKS
Length:607
Mass (Da):69,929
Last modified:December 14, 2011 - v1
Checksum:i224B25EB2602EC06
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002905 Genomic DNA. Translation: AEP86309.1.
RefSeqiYP_004876941.1. NC_016047.1.

Genome annotation databases

EnsemblBacteriaiAEP86309; AEP86309; GYO_1664.
GeneIDi11239211.
KEGGibst:GYO_1664.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CP002905 Genomic DNA. Translation: AEP86309.1 .
RefSeqi YP_004876941.1. NC_016047.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEP86309 ; AEP86309 ; GYO_1664 .
GeneIDi 11239211.
KEGGi bst:GYO_1664.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci BSUB1052585:GJWW-1651-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TU-B-10Imported.

Entry informationi

Entry nameiG4NV71_BACPT
AccessioniPrimary (citable) accession number: G4NV71
Entry historyi
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: October 1, 2014
This is version 15 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteomeImported

External Data

Dasty 3