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G4NV71

- G4NV71_BACPT

UniProt

G4NV71 - G4NV71_BACPT

Protein
Submitted name:

Spore germination DNA ligase YkoU

Gene

ykoU

Organism
Bacillus subtilis subsp. spizizenii (strain TU-B-10)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 15 (01 Oct 2014)
      Sequence version 1 (14 Dec 2011)
      Previous versions | rss
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    Functioni

    GO - Molecular functioni

    1. ATP binding Source: InterPro
    2. DNA ligase (ATP) activity Source: UniProtKB-EC

    GO - Biological processi

    1. DNA recombination Source: InterPro
    2. DNA repair Source: InterPro

    Keywords - Molecular functioni

    LigaseImported

    Enzyme and pathway databases

    BioCyciBSUB1052585:GJWW-1651-MONOMER.

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Spore germination DNA ligase YkoUImported (EC:6.5.1.1Imported)
    Gene namesi
    Name:ykoUImported
    Ordered Locus Names:GYO_1664Imported
    OrganismiBacillus subtilis subsp. spizizenii (strain TU-B-10)Imported
    Taxonomic identifieri1052585 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
    ProteomesiUP000002651: Chromosome

    Family & Domainsi

    Phylogenomic databases

    KOiK01971.

    Family and domain databases

    InterProiIPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view]
    PfamiPF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view]
    TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    G4NV71-1 [UniParc]FASTAAdd to Basket

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    MQPVLTSSPP IGAEWRYEVK YDGYRCILRI HSAGVTLTSR NGLELNSSFP    50
    EITQFAKTAF LHMEKDLPLT LDGEIVCLVN PCRSDFEHIQ VRGRLKRPDK 100
    IQESANARPC CFLAFDLLER RGEDISPLSY LDRKKSLYDL MSAAKLPASP 150
    DPYAKETIQY IPCYDHFDPL WRMVTKFDGE GIVAKKTNSK WLERKRSSDW 200
    LKYKNFKQAY VCITGFNPNN GFLTVSVLKN GVMTPIASVS HGMRDEEKNA 250
    IREIMEQHGH KTSSGEFTLE PSICATVQYL TILQGTLREV SFVGFEFHMD 300
    WTECTYAQVI RHSKSVHPKL QFTSLDKIIF EKNKKTKEDF IQYMIEVSDY 350
    LFPFLKNRAV TVIRYPHGSR SESFFQKNKP DYAPDFVQSF YDGSHEHIVC 400
    EDMSTLLWLA NQLALEFHVP FQTIQSRRPA EIVIDLDPPS RDDFLMAVQA 450
    ANELKRLFDS FGITSFPKLS GNKGIQLYIP LSPEAFTYEE TRQFTQLIAE 500
    YCTNAFPELF TTERLIKNRH GKLYLDYLQH AEGKTIICPY STRGNDLGTV 550
    AAPLYWHEVQ TSLTPAMFTI DTVVDRIKKQ GCPFFDFYRN PQDEPLNAIL 600
    HQLKKKS 607
    Length:607
    Mass (Da):69,929
    Last modified:December 14, 2011 - v1
    Checksum:i224B25EB2602EC06
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002905 Genomic DNA. Translation: AEP86309.1.
    RefSeqiYP_004876941.1. NC_016047.1.

    Genome annotation databases

    EnsemblBacteriaiAEP86309; AEP86309; GYO_1664.
    GeneIDi11239211.
    KEGGibst:GYO_1664.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    CP002905 Genomic DNA. Translation: AEP86309.1 .
    RefSeqi YP_004876941.1. NC_016047.1.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AEP86309 ; AEP86309 ; GYO_1664 .
    GeneIDi 11239211.
    KEGGi bst:GYO_1664.

    Phylogenomic databases

    KOi K01971.

    Enzyme and pathway databases

    BioCyci BSUB1052585:GJWW-1651-MONOMER.

    Family and domain databases

    InterProi IPR012310. DNA_ligase_ATP-dep_cent.
    IPR014146. DNA_pol_LigD_ligase_dom.
    IPR014145. LigD_pol.
    IPR014143. NHEJ_ligase_prk.
    [Graphical view ]
    Pfami PF01068. DNA_ligase_A_M. 1 hit.
    [Graphical view ]
    TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
    TIGR02779. NHEJ_ligase_lig. 1 hit.
    TIGR02776. NHEJ_ligase_prk. 1 hit.
    PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: TU-B-10Imported.

    Entry informationi

    Entry nameiG4NV71_BACPT
    AccessioniPrimary (citable) accession number: G4NV71
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 14, 2011
    Last sequence update: December 14, 2011
    Last modified: October 1, 2014
    This is version 15 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteomeImported

    External Data

    Dasty 3