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G4NV71

- G4NV71_BACPT

UniProt

G4NV71 - G4NV71_BACPT

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Protein
Submitted name: Spore germination DNA ligase YkoU
Gene
ykoU, GYO_1664
Organism
Bacillus subtilis subsp. spizizenii (strain TU-B-10)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Molecular functioni

  1. ATP binding Source: InterPro
  2. DNA ligase (ATP) activity Source: UniProtKB-EC

GO - Biological processi

  1. DNA recombination Source: InterPro
  2. DNA repair Source: InterPro
Complete GO annotation...

Keywords - Molecular functioni

LigaseImported

Enzyme and pathway databases

BioCyciBSUB1052585:GJWW-1651-MONOMER.

Names & Taxonomyi

Protein namesi
Submitted name:
Spore germination DNA ligase YkoUImported (EC:6.5.1.1Imported)
Gene namesi
Name:ykoUImported
Ordered Locus Names:GYO_1664Imported
OrganismiBacillus subtilis subsp. spizizenii (strain TU-B-10)Imported
Taxonomic identifieri1052585 [NCBI]
Taxonomic lineageiBacteriaFirmicutesBacilliBacillalesBacillaceaeBacillus
ProteomesiUP000002651: Chromosome

Family & Domainsi

Phylogenomic databases

KOiK01971.

Family and domain databases

InterProiIPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view]
PfamiPF01068. DNA_ligase_A_M. 1 hit.
[Graphical view]
TIGRFAMsiTIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEiPS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

G4NV71-1 [UniParc]FASTAAdd to Basket

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MQPVLTSSPP IGAEWRYEVK YDGYRCILRI HSAGVTLTSR NGLELNSSFP    50
EITQFAKTAF LHMEKDLPLT LDGEIVCLVN PCRSDFEHIQ VRGRLKRPDK 100
IQESANARPC CFLAFDLLER RGEDISPLSY LDRKKSLYDL MSAAKLPASP 150
DPYAKETIQY IPCYDHFDPL WRMVTKFDGE GIVAKKTNSK WLERKRSSDW 200
LKYKNFKQAY VCITGFNPNN GFLTVSVLKN GVMTPIASVS HGMRDEEKNA 250
IREIMEQHGH KTSSGEFTLE PSICATVQYL TILQGTLREV SFVGFEFHMD 300
WTECTYAQVI RHSKSVHPKL QFTSLDKIIF EKNKKTKEDF IQYMIEVSDY 350
LFPFLKNRAV TVIRYPHGSR SESFFQKNKP DYAPDFVQSF YDGSHEHIVC 400
EDMSTLLWLA NQLALEFHVP FQTIQSRRPA EIVIDLDPPS RDDFLMAVQA 450
ANELKRLFDS FGITSFPKLS GNKGIQLYIP LSPEAFTYEE TRQFTQLIAE 500
YCTNAFPELF TTERLIKNRH GKLYLDYLQH AEGKTIICPY STRGNDLGTV 550
AAPLYWHEVQ TSLTPAMFTI DTVVDRIKKQ GCPFFDFYRN PQDEPLNAIL 600
HQLKKKS 607
Length:607
Mass (Da):69,929
Last modified:December 14, 2011 - v1
Checksum:i224B25EB2602EC06
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002905 Genomic DNA. Translation: AEP86309.1.
RefSeqiYP_004876941.1. NC_016047.1.

Genome annotation databases

EnsemblBacteriaiAEP86309; AEP86309; GYO_1664.
GeneIDi11239211.
KEGGibst:GYO_1664.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
CP002905 Genomic DNA. Translation: AEP86309.1 .
RefSeqi YP_004876941.1. NC_016047.1.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai AEP86309 ; AEP86309 ; GYO_1664 .
GeneIDi 11239211.
KEGGi bst:GYO_1664.

Phylogenomic databases

KOi K01971.

Enzyme and pathway databases

BioCyci BSUB1052585:GJWW-1651-MONOMER.

Family and domain databases

InterProi IPR012310. DNA_ligase_ATP-dep_cent.
IPR014146. DNA_pol_LigD_ligase_dom.
IPR014145. LigD_pol.
IPR014143. NHEJ_ligase_prk.
[Graphical view ]
Pfami PF01068. DNA_ligase_A_M. 1 hit.
[Graphical view ]
TIGRFAMsi TIGR02778. ligD_pol. 1 hit.
TIGR02779. NHEJ_ligase_lig. 1 hit.
TIGR02776. NHEJ_ligase_prk. 1 hit.
PROSITEi PS50160. DNA_LIGASE_A3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: TU-B-10Imported.

Entry informationi

Entry nameiG4NV71_BACPT
AccessioniPrimary (citable) accession number: G4NV71
Entry historyi
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: July 9, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome

External Data

Dasty 3

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