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G4LVK0 (G4LVK0_SCHMA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=3.5.4.6 EMBL CCD58939.1
Gene names
ORF Names:Smp_004120 EMBL CCD58939.1
OrganismSchistosoma mansoni (Blood fluke) [Reference proteome]
Taxonomic identifier6183 [NCBI]
Taxonomic lineageEukaryotaMetazoaPlatyhelminthesTrematodaDigeneaStrigeididaSchistosomatoideaSchistosomatidaeSchistosoma

Protein attributes

Sequence length600 AA.
Sequence statusComplete.
Protein existencePredicted

General annotation (Comments)

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data. EMBL CCD58939.1

Ontologies

Keywords
   Molecular functionHydrolase EMBL CCD58939.1
   Technical termComplete proteome
Reference proteome
Gene Ontology (GO)
   Biological_processIMP biosynthetic process

Inferred from electronic annotation. Source: InterPro

   Molecular_functionAMP deaminase activity

Inferred from electronic annotation. Source: UniProtKB-EC

Complete GO annotation...

Sequences

Sequence LengthMass (Da)Tools
G4LVK0 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: D29787F69B178F2D

FASTA60069,342
        10         20         30         40         50         60 
MEFRKGIMHI ETLSDSPDRS HVNLINGTSE HNHNETVDVD QPMKKDLPEF IIPSLQTFFS 

        70         80         90        100        110        120 
DFDTIRTFVG DGPLKSFCYR RLTYLASKFQ LHSLLNEARE SIEQKRVSHR DFYNIRKVDT 

       130        140        150        160        170        180 
HIHASSCMNQ KHLLRFIKKT IRTKSDTYVC EDPKTKKPMT LSELVDKIGI TLYDLNIDNL 

       190        200        210        220        230        240 
DVHADRNTFH RFDKFNAKYN PIGQSQLREV FLKTDNYIKG VFFAHVLKEV FYDFSESKYQ 

       250        260        270        280        290        300 
NAEPRLSIYG RSINEWDNLA RWAIDCKVYS DNIRWLIQVP RLFDVYHAKG SMKYFQDIIT 

       310        320        330        340        350        360 
NVFQPLFEAT VNPKSHPELH AFLQYVTGFD SVDDESKSDK IVFNASTPTP DEYDLNENPP 

       370        380        390        400        410        420 
YSYYIFYMFA NISQLNQLRS HRGLNTFSFR PHSGEAGNIN HLVTCFLLAE SINHGLLLRK 

       430        440        450        460        470        480 
APVLQYLYYI AQIGIAMSPL SNNSLFLDYH RNPLNDFLAR GLFVSLSTDD PLQFHFTKEP 

       490        500        510        520        530        540 
LIEEYSIAAQ VWKFTSTDMC ELARNSVLMS GFSPLIKSHW LGPNYTQEGV MGNDITRSNL 

       550        560        570        580        590        600 
PNIRVAYRFE TLTQELRLLL NSVLASRTSG SVSPGSNTVM LSPKKTHTST DSSRIDHLKK 

« Hide

References

[1]"A systematically improved high quality genome and transcriptome of the human blood fluke Schistosoma mansoni."
Protasio A.V., Tsai I.J., Babbage A., Nichol S., Hunt M., Aslett M.A., De Silva N., Velarde G.S., Anderson T.J., Clark R.C., Davidson C., Dillon G.P., Holroyd N.E., LoVerde P.T., Lloyd C., McQuillan J., Oliveira G., Otto T.D. expand/collapse author list , Parker-Manuel S.J., Quail M.A., Wilson R.A., Zerlotini A., Dunne D.W., Berriman M.
PLoS Negl. Trop. Dis. 6:E1455-E1455(2012) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: Puerto Rican.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CABG01000014 Genomic DNA. Translation: CCD58939.1.

3D structure databases

ProteinModelPortalG4LVK0.
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblMetazoaSmp_004120.1; Smp_004120.1:pep; Smp_004120.
KEGGsmm:Smp_004120.

Organism-specific databases

CTD8342156.

Phylogenomic databases

KOK01490.
OMALWDAKES.
PhylomeDBG4LVK0.

Family and domain databases

InterProIPR006650. A/AMP_deam_AS.
IPR001365. A/AMP_deaminase_dom.
IPR006329. AMP_deaminase.
[Graphical view]
PANTHERPTHR11359. PTHR11359. 1 hit.
PfamPF00962. A_deaminase. 1 hit.
[Graphical view]
TIGRFAMsTIGR01429. AMP_deaminase. 1 hit.
PROSITEPS00485. A_DEAMINASE. 1 hit.
[Graphical view]
ProtoNetSearch...

Entry information

Entry nameG4LVK0_SCHMA
AccessionPrimary (citable) accession number: G4LVK0
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: July 9, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)