Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Basket 0
(max 400 entries)x

Your basket is currently empty.

Select item(s) and click on "Add to basket" to create your own collection here
(400 entries max)

G4KVB7

- G4KVB7_OSCVS

UniProt

G4KVB7 - G4KVB7_OSCVS

Protein

Alanine racemase

Gene

alr

Organism
Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20)
Status
Unreviewed - Annotation score: 2 out of 5- Protein inferred from homologyi
    • BLAST
    • Align
    • Format
    • Add to basket
    • History
      Entry version 24 (01 Oct 2014)
      Sequence version 1 (14 Dec 2011)
      Previous versions | rss
    • Help video
    • Feedback
    • Comment

    Functioni

    Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids.UniRule annotation

    Catalytic activityi

    L-alanine = D-alanine.UniRule annotation

    Cofactori

    Pyridoxal phosphate.UniRule annotationSAAS annotation

    Pathwayi

    Sites

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Active sitei66 – 661Proton acceptor; specific for D-alanineUniRule annotation
    Binding sitei160 – 1601SubstrateUniRule annotation
    Active sitei293 – 2931Proton acceptor; specific for L-alanineUniRule annotation
    Binding sitei342 – 3421Substrate; via amide nitrogenUniRule annotation

    GO - Molecular functioni

    1. alanine racemase activity Source: UniProtKB-HAMAP
    2. pyridoxal phosphate binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. D-alanine biosynthetic process Source: UniProtKB-UniPathway

    Keywords - Molecular functioni

    IsomeraseUniRule annotationSAAS annotationImported

    Keywords - Ligandi

    Pyridoxal phosphateUniRule annotationSAAS annotation

    Enzyme and pathway databases

    BioCyciOVAL693746:GJWX-967-MONOMER.
    UniPathwayiUPA00042; UER00497.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Alanine racemaseUniRule annotation (EC:5.1.1.1UniRule annotation)
    Gene namesi
    Name:alrImported
    Ordered Locus Names:OBV_09480Imported
    OrganismiOscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20)Imported
    Taxonomic identifieri693746 [NCBI]
    Taxonomic lineageiBacteriaFirmicutesClostridiaClostridialesOscillospiraceaeOscillibacter
    ProteomesiUP000005219: Chromosome

    PTM / Processingi

    Amino acid modifications

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Modified residuei66 – 661N6-(pyridoxal phosphate)lysineUniRule annotation

    Structurei

    3D structure databases

    ProteinModelPortaliG4KVB7.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the alanine racemase family.UniRule annotation

    Phylogenomic databases

    KOiK18348.

    Family and domain databases

    Gene3Di2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    HAMAPiMF_01201. Ala_racemase.
    InterProiIPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR029066. PLP-binding_barrel.
    [Graphical view]
    PfamiPF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    [Graphical view]
    PRINTSiPR00992. ALARACEMASE.
    SMARTiSM01005. Ala_racemase_C. 1 hit.
    [Graphical view]
    SUPFAMiSSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    TIGRFAMsiTIGR00492. alr. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    G4KVB7-1 [UniParc]FASTAAdd to Basket

    « Hide

    MFRITAPWFR SRPVLLKGRK RMPDKREPAF CRGRAWIELD QKALRHNVGV    50
    LRKLLPDGCE LMPAVKTNAY GHGAVLISRE LNRLGVNAFC VATVQEGAEL 100
    RNNDITGTIL VLGYTHPKDF LLLRRYHLTQ TVLDLSYAKI LDRYGKKISV 150
    HVKIDTGMRR LGERSEKIEE ISKIFECRNL NIEGIFTHLC VADENSSESV 200
    AFTHAQAKAF YDVVAELHQR GFICPKKHIV SSDGLLYYPE LAENYARVGI 250
    ALYGVLSTRA DTERCGISLE PVLSIKARIA LVKDLFQGEA AGYGLQFVAS 300
    QDSRIAVVAI GYGDGIPRSL SCGVGSVLIQ GIKAPIVGRI CMDQMLVDIS 350
    NIPNVKAGDV AVIIGQSGDE KITACDLAEQ DGTISNEILS RLGERLERQF 400
    VGKKEF 406
    Length:406
    Mass (Da):44,958
    Last modified:December 14, 2011 - v1
    Checksum:i385ECD3435455264
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012044 Genomic DNA. Translation: BAK98146.1.
    RefSeqiYP_004880652.1. NC_016048.1.

    Genome annotation databases

    EnsemblBacteriaiBAK98146; BAK98146; OBV_09480.
    GeneIDi11233629.
    KEGGiova:OBV_09480.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AP012044 Genomic DNA. Translation: BAK98146.1 .
    RefSeqi YP_004880652.1. NC_016048.1.

    3D structure databases

    ProteinModelPortali G4KVB7.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai BAK98146 ; BAK98146 ; OBV_09480 .
    GeneIDi 11233629.
    KEGGi ova:OBV_09480.

    Phylogenomic databases

    KOi K18348.

    Enzyme and pathway databases

    UniPathwayi UPA00042 ; UER00497 .
    BioCyci OVAL693746:GJWX-967-MONOMER.

    Family and domain databases

    Gene3Di 2.40.37.10. 1 hit.
    3.20.20.10. 1 hit.
    HAMAPi MF_01201. Ala_racemase.
    InterProi IPR000821. Ala_racemase.
    IPR009006. Ala_racemase/Decarboxylase_C.
    IPR011079. Ala_racemase_C.
    IPR001608. Ala_racemase_N.
    IPR029066. PLP-binding_barrel.
    [Graphical view ]
    Pfami PF00842. Ala_racemase_C. 1 hit.
    PF01168. Ala_racemase_N. 1 hit.
    [Graphical view ]
    PRINTSi PR00992. ALARACEMASE.
    SMARTi SM01005. Ala_racemase_C. 1 hit.
    [Graphical view ]
    SUPFAMi SSF50621. SSF50621. 1 hit.
    SSF51419. SSF51419. 1 hit.
    TIGRFAMsi TIGR00492. alr. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Whole genome sequence of Oscillibacter valericigenes Sjm18-20."
      Katano Y., Fujinami S., Kawakoshi A., Ohji S., Nakazawa H., Ankai A., Oguchi A., Fukui S., Terui Y., Harada T., Takahashi M., Suzuki K., Fujita N.
      Submitted (JAN-2011) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: DSM 18026 / NBRC 101213 / Sjm18-20Imported.

    Entry informationi

    Entry nameiG4KVB7_OSCVS
    AccessioniPrimary (citable) accession number: G4KVB7
    Entry historyi
    Integrated into UniProtKB/TrEMBL: December 14, 2011
    Last sequence update: December 14, 2011
    Last modified: October 1, 2014
    This is version 24 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3