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G4FFF4 (G4FFF4_THEMA) Unreviewed, UniProtKB/TrEMBL

Last modified July 9, 2014. Version 14. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein names
EC=2.7.8.- EMBL AGL50349.1

Nucleotidyl transferase EMBL AHD18687.1
Gene names
ORF Names:THEMA_07220 EMBL AHD18687.1, Tmari_1425 EMBL AGL50349.1
OrganismThermotoga maritima (strain ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) EMBL AGL50349.1
Taxonomic identifier243274 [NCBI]
Taxonomic lineageBacteriaThermotogaeThermotogalesThermotogaceaeThermotoga

Protein attributes

Sequence length241 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Regions

Region157 – 1582Phosphate 2 binding PDB 4JD0

Sites

Metal binding1311Sodium PDB 4JD0
Metal binding2101Sodium PDB 4JD0
Metal binding2111Sodium; via carbonyl oxygen PDB 4JD0
Metal binding2131Sodium; via carbonyl oxygen PDB 4JD0
Binding site1221Phosphate 1 PDB 4JD0
Binding site1921Chloride; via amide nitrogen PDB 4JD0
Binding site1921Phosphate 2 PDB 4JD0
Binding site1931Phosphate 3 PDB 4JD0
Binding site1971Phosphate 3 PDB 4JD0
Binding site2071Phosphate 1; via carbonyl oxygen PDB 4JD0

Sequences

Sequence LengthMass (Da)Tools
G4FFF4 [UniParc].

Last modified December 14, 2011. Version 1.
Checksum: 8153E6A8592ECF10

FASTA24127,323
        10         20         30         40         50         60 
MREAIVLASG AGKRLRSVTG DVPKVFYRFD GCELVKYPMI SLMKNGVERF VLVVSEGYRD 

        70         80         90        100        110        120 
LGEKVLNDLG VEGIVVENKK VELGNAYSFF LSEPYVESEK FFLSCGDSLF PPEALKSAFS 

       130        140        150        160        170        180 
EDEFHIKLGV SKRSDLIDPE EASKVLVNED RIVKIGKRID EYNYFDTGVF VMTKKVYSLK 

       190        200        210        220        230        240 
ESFSWTEEIS LYHVLQKAVD TGMIVKVFDF GNALWTEIDS PEDLNEKVYE LMKKIKEGVA 


C 

« Hide

References

« Hide 'large scale' references
[1]"Structure of the inositol-1-phosphate cytidylyltransferase from Thermotoga maritima."
Kurnasov O.V., Luk H.J., Roberts M.F., Stec B.
Acta Crystallogr. D 69:1808-1817(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: X-RAY CRYSTALLOGRAPHY (1.80 ANGSTROMS) IN COMPLEX WITH CHLORIDE; PHOSPHATE AND SODIUM.
[2]"The genome organization of Thermotoga maritima reflects its lifestyle."
Latif H., Lerman J.A., Portnoy V.A., Tarasova Y., Nagarajan H., Schrimpe-Rutledge A.C., Smith R.D., Adkins J.N., Lee D.H., Qiu Y., Zengler K.
PLoS Genet. 9:E1003485-E1003485(2013) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: ATCC 43589 / MSB8 / DSM 3109 / JCM 10099 and MSB8 EMBL AGL50349.1.
[3]DOE Joint Genome Institute
Noll K.M., Huntemann M., Han J., Chen A., Kyrpides N., Mavromatis K., Markowitz V., Palaniappan K., Ivanova N., Schaumberg A., Pati A., Liolios K., Nordberg H.P., Cantor M.N., Hua S.X., Woyke T.
Submitted (DEC-2013) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: MSB8 EMBL AHD18687.1.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
CP004077 Genomic DNA. Translation: AGL50349.1.
CP007013 Genomic DNA. Translation: AHD18687.1.
RefSeqYP_007977774.1. NC_021214.1.
YP_008991491.1. NC_023151.1.

3D structure databases

PDBe
RCSB-PDB
PDBj
EntryMethodResolution (Å)ChainPositionsPDBsum
4JD0X-ray1.80A1-241[»]
ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAGL50349; AGL50349; Tmari_1425.
KEGGtmi:THEMA_07220.
tmm:Tmari_1425.

Family and domain databases

Gene3D3.90.550.10. 1 hit.
InterProIPR005835. NTP_transferase.
IPR029044. Nucleotide-diphossugar_trans.
[Graphical view]
PfamPF00483. NTP_transferase. 1 hit.
[Graphical view]
SUPFAMSSF53448. SSF53448. 1 hit.
ProtoNetSearch...

Entry information

Entry nameG4FFF4_THEMA
AccessionPrimary (citable) accession number: G4FFF4
Entry history
Integrated into UniProtKB/TrEMBL: December 14, 2011
Last sequence update: December 14, 2011
Last modified: July 9, 2014
This is version 14 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)