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G3X9T1 (G3X9T1_MOUSE) Unreviewed, UniProtKB/TrEMBL

Last modified April 16, 2014. Version 25. Feed History...

Clusters with 100%, 90%, 50% identity | Third-party data text xml rdf/xml gff fasta
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Names and origin

Protein attributes

Sequence length886 AA.
Sequence statusComplete.
Protein existencePredicted

Sequences

Sequence LengthMass (Da)Tools
G3X9T1 [UniParc].

Last modified November 16, 2011. Version 1.
Checksum: F7A4FE6C3FA205D4

FASTA886100,727
        10         20         30         40         50         60 
MTLEGFGFAT KKTSRTEDRG AMAADPNFQQ KSQPLGAEEQ PESCERWMSF EDVTVNFSQE 

        70         80         90        100        110        120 
EWQHLDSAQR CLYQEVMLEI YSHLLAVGYS IPSPGVIFRM EKGKEAQTAK AEFPGQRCQE 

       130        140        150        160        170        180 
KSGNDTLPQK ASGKTSVYSN VASEVTRDGS WCSLLQELWQ GADITKRGQQ NQILLFPPGS 

       190        200        210        220        230        240 
FLKKTLSKNS DHEYQKPRET IPLGPYLIST QEGLPQYHSL PKSLDVSLGA NGHNERDQLI 

       250        260        270        280        290        300 
DIVASSQLLI PGSCNANCVV THGGEESYRS TGNGDVLSHK QPLIYGNRFQ VKADQSSQCQ 

       310        320        330        340        350        360 
EVLYAISLHK PEITLTVDRP IVSYNGGKAF LYVSDSLSHP FQLKVDRVVH TGGDPYKCSS 

       370        380        390        400        410        420 
CEKSFCNAAA LQQHEQIHTE EKLYVCTLCG KAFSDGSAFY EHELIHKNHT PFICDICGKA 

       430        440        450        460        470        480 
FLRKSELTSH KQCHNGEKPY KCNDCEKSFK FPSQLKVHHQ IHTGEKPYEC RECGKSFSKT 

       490        500        510        520        530        540 
AKLKVHQRIH TGEKPYVCSQ CGKAFNQKSI LDRHEKLHPG EKPYKCNDCG KSFNYPSQLK 

       550        560        570        580        590        600 
VHCHSHTGEK PYKCHECGKS FNFPCELKVH YQNHTGEKPY KCRECWKLFS KMSQLKAHYR 

       610        620        630        640        650        660 
VHTGERPYKC SHCGKAFSTK EQVQEHERIH TGEKPFVCTE CGKAFSSRSS FRKHQLIHTK 

       670        680        690        700        710        720 
EKPFVSQKCE TGLQEATLIP HQQLHIGEKP YKCPDCGKLF NYPSQLKSHY QIHTGEKPCK 

       730        740        750        760        770        780 
CPDCGKSFSK TSQLKAHSRI HTGERPYVCS VCGKAFKQLS TLSRHEKIHM VEKPYKCSFC 

       790        800        810        820        830        840 
GKSFCSPSEL KVHLLIHTGE RPYKCSSCWK AFCTKVQLQE HERIHTGERP YVCTHCGKAF 

       850        860        870        880 
RSRSVFSKHK LIHRKETPFI CERCGKVFLQ KSELTSHLQT HIEDKP 

« Hide

References

« Hide 'large scale' references
[1]"A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W. expand/collapse author list , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Mixed EMBL EDL22647.1.
[2]Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
Cited for: NUCLEOTIDE SEQUENCE.
Strain: Mixed EMBL EDL22647.1.
[3]"Lineage-specific biology revealed by a finished genome assembly of the mouse."
Church D.M., Goodstadt L., Hillier L.W., Zody M.C., Goldstein S., She X., Bult C.J., Agarwala R., Cherry J.L., DiCuccio M., Hlavina W., Kapustin Y., Meric P., Maglott D., Birtle Z., Marques A.C., Graves T., Zhou S. expand/collapse author list , Teague B., Potamousis K., Churas C., Place M., Herschleb J., Runnheim R., Forrest D., Amos-Landgraf J., Schwartz D.C., Cheng Z., Lindblad-Toh K., Eichler E.E., Ponting C.P.
PLoS Biol. 7:E1000112-E1000112(2009) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: C57BL/6J Ensembl ENSMUSP00000103620 Ensembl ENSMUSP00000040282.
[4]Ensembl
Submitted (SEP-2011) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000103620.
[5]Ensembl
Submitted (FEB-2012) to UniProtKB
Cited for: IDENTIFICATION.
Strain: C57BL/6J Ensembl ENSMUSP00000040282.
+Additional computationally mapped references.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
AC123045 Genomic DNA. No translation available.
AC149091 Genomic DNA. No translation available.
CH466603 Genomic DNA. Translation: EDL22647.1.
RefSeqNP_081540.3. NM_027264.3.
XP_006541242.1. XM_006541179.1.
XP_006541243.1. XM_006541180.1.
XP_006541244.1. XM_006541181.1.
XP_006541245.1. XM_006541182.1.
XP_006541246.1. XM_006541183.1.
XP_006541247.1. XM_006541184.1.
XP_006541248.1. XM_006541185.1.
UniGeneMm.45367.

3D structure databases

ModBaseSearch...
MobiDBSearch...

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblENSMUST00000048015; ENSMUSP00000040282; ENSMUSG00000012640.
ENSMUST00000107986; ENSMUSP00000103620; ENSMUSG00000012640.
GeneID69930.
KEGGmmu:69930.
UCSCuc009gmj.1. mouse.

Organism-specific databases

CTD69930.
MGIMGI:1917180. Zfp715.

Phylogenomic databases

GeneTreeENSGT00750000118251.
KOK09228.
OMATPFICER.
TreeFamTF343410.

Family and domain databases

Gene3D3.30.160.60. 19 hits.
InterProIPR001909. Krueppel-associated_box.
IPR007087. Znf_C2H2.
IPR015880. Znf_C2H2-like.
IPR013087. Znf_C2H2/integrase_DNA-bd.
[Graphical view]
PfamPF01352. KRAB. 1 hit.
PF00096. zf-C2H2. 1 hit.
[Graphical view]
SMARTSM00349. KRAB. 1 hit.
SM00355. ZnF_C2H2. 18 hits.
[Graphical view]
SUPFAMSSF109640. SSF109640. 1 hit.
PROSITEPS50805. KRAB. 1 hit.
PS00028. ZINC_FINGER_C2H2_1. 18 hits.
PS50157. ZINC_FINGER_C2H2_2. 18 hits.
[Graphical view]
ProtoNetSearch...

Other

NextBio330633.
SOURCESearch...

Entry information

Entry nameG3X9T1_MOUSE
AccessionPrimary (citable) accession number: G3X9T1
Entry history
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: April 16, 2014
This is version 25 of the entry and version 1 of the sequence. [Complete history]
Entry statusUnreviewed (UniProtKB/TrEMBL)