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G3X9P5

- G3X9P5_MOUSE

UniProt

G3X9P5 - G3X9P5_MOUSE

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Protein
Submitted name: Ligand-dependent nuclear receptor-interacting factor 1
Gene
Lrif1, 4933421E11Rik, mCG_22164
Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5 - Protein predictedi

Functioni

GO - Biological processi

  1. regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Ligand-dependent nuclear receptor-interacting factor 1Imported
Submitted name:
MCG22164, isoform CRA_aImported
Gene namesi
Name:Lrif1Imported
Synonyms:4933421E11RikImported
ORF Names:mCG_22164Imported
OrganismiMus musculus (Mouse)Imported
Taxonomic identifieri10090 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
ProteomesiUP000000589: Chromosome 3

Organism-specific databases

MGIiMGI:2445214. Lrif1.

Family & Domainsi

Phylogenomic databases

GeneTreeiENSGT00390000017353.

Family and domain databases

InterProiIPR026191. LRIF1.
[Graphical view]
PANTHERiPTHR16131. PTHR16131. 1 hit.

Sequencei

Sequence statusi: Complete.

G3X9P5-1 [UniParc]FASTAAdd to Basket

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MAGGTRARSR ANKAKPTQYE MASIVKKEIQ EKGNNKKYSQ GSHTNIKASC    50
LKNDAEFKKL FGLTKDLRVC LTRIPDHLSS GKSFNSFNSL MKSSSYKDAN 100
IVVKKEEKKQ SFSKKRKAET MKMGNTKKIK IENADDTVMS IMNGTDVASS 150
QPLSSILPTS DISQHNIVTS HSTTREDKRT EAEHCSHEKQ EKGTLSSSTS 200
FEQSTFLNKN FMEDIFPVTP PELEETIRDE KIRRLKQILR EKEAALEELR 250
KKMYQKQ 257
Length:257
Mass (Da):29,218
Last modified:November 16, 2011 - v1
Checksum:i5EC261D4831CFD90
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC117200 Genomic DNA. No translation available.
AC117255 Genomic DNA. No translation available.
CH466607 Genomic DNA. Translation: EDL01880.1.
RefSeqiNP_001034567.1. NM_001039478.1.
UniGeneiMm.259638.

Genome annotation databases

EnsembliENSMUST00000098751; ENSMUSP00000096347; ENSMUSG00000056260.
GeneIDi321000.
KEGGimmu:321000.
UCSCiuc008qwh.1. mouse.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AC117200 Genomic DNA. No translation available.
AC117255 Genomic DNA. No translation available.
CH466607 Genomic DNA. Translation: EDL01880.1 .
RefSeqi NP_001034567.1. NM_001039478.1.
UniGenei Mm.259638.

3D structure databases

ModBasei Search...
MobiDBi Search...

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSMUST00000098751 ; ENSMUSP00000096347 ; ENSMUSG00000056260 .
GeneIDi 321000.
KEGGi mmu:321000.
UCSCi uc008qwh.1. mouse.

Organism-specific databases

CTDi 55791.
MGIi MGI:2445214. Lrif1.

Phylogenomic databases

GeneTreei ENSGT00390000017353.

Miscellaneous databases

NextBioi 397833.
SOURCEi Search...

Family and domain databases

InterProi IPR026191. LRIF1.
[Graphical view ]
PANTHERi PTHR16131. PTHR16131. 1 hit.
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
    Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
    , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
    Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  2. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
    Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE.
    Strain: MixedImported.
  3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: C57BL/6JImported.
  4. Ensembl
    Submitted (SEP-2011) to UniProtKB
    Cited for: IDENTIFICATION.
    Strain: C57BL/6JImported.

Entry informationi

Entry nameiG3X9P5_MOUSE
AccessioniPrimary (citable) accession number: G3X9P5
Entry historyi
Integrated into UniProtKB/TrEMBL: November 16, 2011
Last sequence update: November 16, 2011
Last modified: February 19, 2014
This is version 13 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

External Data

Dasty 3

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