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G3X9P5

- G3X9P5_MOUSE

UniProt

G3X9P5 - G3X9P5_MOUSE

Protein
Submitted name:

Ligand-dependent nuclear receptor-interacting factor 1

Gene

Lrif1

Organism
Mus musculus (Mouse)
Status
Unreviewed - Annotation score: 1 out of 5- Protein predictedi
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    • History
      Entry version 14 (01 Oct 2014)
      Sequence version 1 (16 Nov 2011)
      Previous versions | rss
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    Functioni

    GO - Biological processi

    1. regulation of transcription, DNA-templated Source: InterPro

    Names & Taxonomyi

    Protein namesi
    Submitted name:
    Ligand-dependent nuclear receptor-interacting factor 1Imported
    Submitted name:
    MCG22164, isoform CRA_aImported
    Gene namesi
    Name:Lrif1Imported
    Synonyms:4933421E11RikImported
    ORF Names:mCG_22164Imported
    OrganismiMus musculus (Mouse)Imported
    Taxonomic identifieri10090 [NCBI]
    Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresRodentiaSciurognathiMuroideaMuridaeMurinaeMusMus
    ProteomesiUP000000589: Chromosome 3

    Organism-specific databases

    MGIiMGI:2445214. Lrif1.

    Family & Domainsi

    Phylogenomic databases

    GeneTreeiENSGT00390000017353.

    Family and domain databases

    InterProiIPR026191. LRIF1.
    [Graphical view]
    PANTHERiPTHR16131. PTHR16131. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    G3X9P5-1 [UniParc]FASTAAdd to Basket

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    MAGGTRARSR ANKAKPTQYE MASIVKKEIQ EKGNNKKYSQ GSHTNIKASC    50
    LKNDAEFKKL FGLTKDLRVC LTRIPDHLSS GKSFNSFNSL MKSSSYKDAN 100
    IVVKKEEKKQ SFSKKRKAET MKMGNTKKIK IENADDTVMS IMNGTDVASS 150
    QPLSSILPTS DISQHNIVTS HSTTREDKRT EAEHCSHEKQ EKGTLSSSTS 200
    FEQSTFLNKN FMEDIFPVTP PELEETIRDE KIRRLKQILR EKEAALEELR 250
    KKMYQKQ 257
    Length:257
    Mass (Da):29,218
    Last modified:November 16, 2011 - v1
    Checksum:i5EC261D4831CFD90
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC117200 Genomic DNA. No translation available.
    AC117255 Genomic DNA. No translation available.
    CH466607 Genomic DNA. Translation: EDL01880.1.
    RefSeqiNP_001034567.1. NM_001039478.1.
    UniGeneiMm.259638.

    Genome annotation databases

    EnsembliENSMUST00000098751; ENSMUSP00000096347; ENSMUSG00000056260.
    GeneIDi321000.
    KEGGimmu:321000.
    UCSCiuc008qwh.1. mouse.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    AC117200 Genomic DNA. No translation available.
    AC117255 Genomic DNA. No translation available.
    CH466607 Genomic DNA. Translation: EDL01880.1 .
    RefSeqi NP_001034567.1. NM_001039478.1.
    UniGenei Mm.259638.

    3D structure databases

    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    Ensembli ENSMUST00000098751 ; ENSMUSP00000096347 ; ENSMUSG00000056260 .
    GeneIDi 321000.
    KEGGi mmu:321000.
    UCSCi uc008qwh.1. mouse.

    Organism-specific databases

    CTDi 55791.
    MGIi MGI:2445214. Lrif1.

    Phylogenomic databases

    GeneTreei ENSGT00390000017353.

    Miscellaneous databases

    NextBioi 397833.
    SOURCEi Search...

    Family and domain databases

    InterProi IPR026191. LRIF1.
    [Graphical view ]
    PANTHERi PTHR16131. PTHR16131. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome."
      Mural R.J., Adams M.D., Myers E.W., Smith H.O., Miklos G.L., Wides R., Halpern A., Li P.W., Sutton G.G., Nadeau J., Salzberg S.L., Holt R.A., Kodira C.D., Lu F., Chen L., Deng Z., Evangelista C.C., Gan W.
      , Heiman T.J., Li J., Li Z., Merkulov G.V., Milshina N.V., Naik A.K., Qi R., Shue B.C., Wang A., Wang J., Wang X., Yan X., Ye J., Yooseph S., Zhao Q., Zheng L., Zhu S.C., Biddick K., Bolanos R., Delcher A.L., Dew I.M., Fasulo D., Flanigan M.J., Huson D.H., Kravitz S.A., Miller J.R., Mobarry C.M., Reinert K., Remington K.A., Zhang Q., Zheng X.H., Nusskern D.R., Lai Z., Lei Y., Zhong W., Yao A., Guan P., Ji R.R., Gu Z., Wang Z.Y., Zhong F., Xiao C., Chiang C.C., Yandell M., Wortman J.R., Amanatides P.G., Hladun S.L., Pratts E.C., Johnson J.E., Dodson K.L., Woodford K.J., Evans C.A., Gropman B., Rusch D.B., Venter E., Wang M., Smith T.J., Houck J.T., Tompkins D.E., Haynes C., Jacob D., Chin S.H., Allen D.R., Dahlke C.E., Sanders R., Li K., Liu X., Levitsky A.A., Majoros W.H., Chen Q., Xia A.C., Lopez J.R., Donnelly M.T., Newman M.H., Glodek A., Kraft C.L., Nodell M., Ali F., An H.J., Baldwin-Pitts D., Beeson K.Y., Cai S., Carnes M., Carver A., Caulk P.M., Center A., Chen Y.H., Cheng M.L., Coyne M.D., Crowder M., Danaher S., Davenport L.B., Desilets R., Dietz S.M., Doup L., Dullaghan P., Ferriera S., Fosler C.R., Gire H.C., Gluecksmann A., Gocayne J.D., Gray J., Hart B., Haynes J., Hoover J., Howland T., Ibegwam C., Jalali M., Johns D., Kline L., Ma D.S., MacCawley S., Magoon A., Mann F., May D., McIntosh T.C., Mehta S., Moy L., Moy M.C., Murphy B.J., Murphy S.D., Nelson K.A., Nuri Z., Parker K.A., Prudhomme A.C., Puri V.N., Qureshi H., Raley J.C., Reardon M.S., Regier M.A., Rogers Y.H., Romblad D.L., Schutz J., Scott J.L., Scott R., Sitter C.D., Smallwood M., Sprague A.C., Stewart E., Strong R.V., Suh E., Sylvester K., Thomas R., Tint N.N., Tsonis C., Wang G., Wang G., Williams M.S., Williams S.M., Windsor S.M., Wolfe K., Wu M.M., Zaveri J., Chaturvedi K., Gabrielian A.E., Ke Z., Sun J., Subramanian G., Venter J.C., Pfannkoch C.M., Barnstead M., Stephenson L.D.
      Science 296:1661-1671(2002) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    2. Mural R.J., Adams M.D., Myers E.W., Smith H.O., Venter J.C.
      Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE.
      Strain: MixedImported.
    3. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: C57BL/6JImported.
    4. Ensembl
      Submitted (SEP-2011) to UniProtKB
      Cited for: IDENTIFICATION.
      Strain: C57BL/6JImported.

    Entry informationi

    Entry nameiG3X9P5_MOUSE
    AccessioniPrimary (citable) accession number: G3X9P5
    Entry historyi
    Integrated into UniProtKB/TrEMBL: November 16, 2011
    Last sequence update: November 16, 2011
    Last modified: October 1, 2014
    This is version 14 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiUnreviewed (UniProtKB/TrEMBL)

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteomeImported

    External Data

    Dasty 3